Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq210 120 2e-22
>seq210
Length=1335347
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || | ||| |||||||||||||| | |||| || || || ||||||||||| |
Sbjct 1131600 CCGCCTCGCAACCGCAGCACCAAATGCAACGTGCTCTCCTTCTGGATGTTATAATCGGAC 1131541
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || || || || ||||| |||||| | || | | ||||| || ||||||
Sbjct 1131540 AGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCTGGCGGA 1131481
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
||||| || ||||| || | | ||||| ||||| | |||| ||||| ||||||
Sbjct 1131480 ATACCTTCCTTGTCCTGGA-TCTTTGTCTTGACGTTGTCTATCGTGTCGCTGGATTCTAC 1131422
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| ||||| ||||||||||| || | || || || || ||||||||
Sbjct 1131421 TTCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACGAAGATCTGCAT 1131374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385217974641801
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |