Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq210 125 7e-24
seq123 105 6e-18
>seq210
Length=1335347
Score = 125 bits (138), Expect = 7e-24
Identities = 156/212 (74%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGA 133512
||||| | ||| ||| ||||| || || |||||| || ||| || || ||||| |
Sbjct 1131579 AAATGCAACGTGCTCTCCTTCTGGATGTTATAATCGGACAGCGTCCGGCCG--TCCTCAA 1131522
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||| || || || | ||||| ||||||||||| || || || ||||||||||| ||
Sbjct 1131521 GCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCTGGCGGAATACCTTCCTTGTCCTGGA 1131462
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||||| ||||| | || | ||||||| ||| || || || | |||| |||||||
Sbjct 1131461 TCTTTGTCTTGACGTTGTCTATCGTGTCGCTGGATTCTACTTCCAGAGTGATAGTTTTGC 1131402
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664
| ||||| || || ||||| ||||||||| ||
Sbjct 1131401 CCGTCAGTGTCTTGACGAAGATCTGCATGCCT 1131370
Score = 111 bits (122), Expect = 2e-19
Identities = 112/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
|||||||||||| || || || | ||||| || |||||||| ||||||||||| |||||
Sbjct 1131301 GTCCTCGAGCTGTTTTCCTGCAAAGATGAGACGTTGCTGGTCTGGAGGGATGCCCTCCTT 1131242
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| |||||| ||||| | || | |||||| ||| || || || | ||||
Sbjct 1131241 GTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGATTCGACCTCAAGAGTGAT 1131182
Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGA 133650
||| ||||||||||||||||| ||||
Sbjct 1131181 GGTCTTGCCGGTCAGAGTTTTCACGA 1131156
Score = 107 bits (118), Expect = 2e-18
Identities = 128/174 (74%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
|||| ||| ||||| || ||||| ||| | ||| |||||||||||| || ||
Sbjct 1131045 GGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGTTTTCC 1130986
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || ||||||||||| || |||||||| |||||||| |||||| |||
Sbjct 1130985 TGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTT 1130926
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|| | |||| |||||| ||| |||||| |||| ||||| || ||||| ||
Sbjct 1130925 GACGTTGTCAATAGTGTCGCTGGACTCCACCTCGAGGGTGATAGTCTTGCCAGT 1130872
>seq123
Length=229
Score = 105 bits (116), Expect = 6e-18
Identities = 102/131 (78%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 133530 ATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGC 133589
|| |||| ||||||||| || || |||||||||||||| |||||| ||||| | |
Sbjct 223 ATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTC 164
Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649
|||| |||||| ||||||| || || | ||||| ||| |||||||| || || || ||
Sbjct 163 TCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACA 104
Query 133650 AAAATCTGCAT 133660
|| ||||||||
Sbjct 103 AAGATCTGCAT 93
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483419222839640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |