Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq241 149 1e-30 >seq241 Length=1026449 Score = 149 bits (164), Expect = 1e-30 Identities = 325/481 (68%), Gaps = 7/481 (1%) Strand=Plus/Minus Query 110511 CAATTGGCTTCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGAT 110570 ||| ||||||| ||||| || | | || || || || ||| |||||||| || || Sbjct 700123 CAAATGGCTTCCTGCTTCCTCATTGACATGAAGGAGGACAGTATCGAAGGTATCTACGAC 700064 Query 110571 GCTCTTAAAGAAACTGCTCTTATTTCTAAAAACT-CTGGAGGAATTGGTATTCACGTTCA 110629 | || || |||| | ||||| ||| ||| |||||||||| ||| || |||| || Sbjct 700063 ACACTGAAGACCTGTGCTTTGATTTC-AAAGACTGCTGGAGGAATCGGTCTTAACGTCCA 700005 Query 110630 TGATATTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGG-TGCTTCAACTGGACTTG 110688 ||| || | | ||| | | || || | | || || | || |||| ||| | | Sbjct 700004 CCGTATCCGTGCCACCGGATCCTACATTGCTGGAACCAACGGCTCCTCCAAC-GGAATCG 699946 Query 110689 TTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAA 110748 | || ||| | | || |||||| ||||||| | |||||| | || ||||| || | Sbjct 699945 TCCCCATGCTTCGTGTGTTCAACAACACTGCCAGATATGTCGACCAGGGTGGCAACAAGC 699886 Query 110749 AT---GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAG 110805 | || | ||||||||||| || || || ||||| | ||||| ||||| ||| | | Sbjct 699885 GTCCAGGTGCCTTTGCTATCTACCTGGAGCCATGGCACGCTGATATCTTTGAGTTCCTTG 699826 Query 110806 AACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGT 110865 | || || || || || ||| |||||| | || |||||| |||| | || ||| Sbjct 699825 ACCTCCGCAAGAACCATGGAAAGGAAGAAGTCCGTGCCCGTGATCTATTCTTGGCCTTGT 699766 Query 110866 GGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTC 110925 ||| | | ||||| |||||||| || ||| || | |||||| ||| | || | || | Sbjct 699765 GGACTCCTGATTTGTTCATGAAGCGAGTTGAAAAGAATGGCGATTGGACCCTATTCTGCC 699706 Query 110926 CTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAA 110985 || || ||||||| | ||||||| || ||| ||||||| || | | ||||||| Sbjct 699705 CTAATGAGGCTCCTGGATTGGCTGATGTCTACGGAGAAGAGTTCGAGGCATTGTACGAAA 699646 Query 110986 A 110986 | Sbjct 699645 A 699645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186808831223821