Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq241 114 1e-20
>seq241
Length=1026449
Score = 114 bits (126), Expect = 1e-20
Identities = 356/548 (65%), Gaps = 5/548 (1%)
Strand=Plus/Plus
Query 147884 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGC 147940
|||| || |||||||| || || | ||||| || | |||||| |||||| || |
Sbjct 699838 AGATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCTGGACGCTTGTTGCCAC 699897
Query 147941 CCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCG 148000
|||||||||||| | | ||||||| ||||| || | |||||| | | ||| | |
Sbjct 699898 CCTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGGACGATTCCGTTGG 699957
Query 148001 CAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGC 148060
| ||||||||| | || | | ||| ||| || | ||| ||||||| |
Sbjct 699958 AGGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGATACGGTGGACGTTAAGAC 700017
Query 148061 CAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCG 148119
| || || || || || |||||| || ||| || || ||| |||||| ||
Sbjct 700018 CGATTCCTCCAGCAGT-CTTTGAAATCAAAGCACAGGTCTTCAGTGTGTCGTAGATACCT 700076
Query 148120 TCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTT 148179
||||| ||||| | || | | ||| | || || ||| ||||||||| | | |||
Sbjct 700077 TCGATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGGCTGCGGGGTT 700136
Query 148180 CCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATAC 148239
|| || ||| || |||||| || || || || |||| || ||| | ||
Sbjct 700137 CCGGCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTCTGGGACATGAGATTGTAT 700196
Query 148240 GTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATG 148299
|| ||||| | | || | ||| || ||||| || || | || || ||||| | |||
Sbjct 700197 GTTTCAATTACTTTCTCAACGTCCTCACCGTGGATACCGACGGCAACTCGCATTATCATA 700256
Query 148300 TGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTT 148359
|||||||| ||||| ||||| | |||| | || || ||| |||| || ||
Sbjct 700257 TGCTGTGGCCGTTCAGCAACCTTGCCGTTGGTTCGTAGCAGGTATGACCTTTCAAGCGTC 700316
Query 148360 TTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCGCATCTAGTGTC 148419
||| | || || |||| ||| | ||| || | ||||| | || |||| | |||
Sbjct 700317 TTGAAGCCGAAATACTGGTAGTTAAAGTCACGGTCGTACACAATAGCCGAGTTGAGTTCT 700376
Query 148420 TCAGCATG 148427
||||||||
Sbjct 700377 TCAGCATG 700384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476609645055960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |