Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq241 129 8e-24
seq144 105 1e-16
>seq241
Length=1026449
Score = 129 bits (142), Expect = 8e-24
Identities = 202/289 (70%), Gaps = 0/289 (0%)
Strand=Plus/Minus
Query 259894 CATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCG 259953
|||||| ||| | | |||||| || | ||||| ||||| |||||||| || ||||
Sbjct 700187 CATGTCCCAGAAATACTTCACCCATGCCTCTCCCACTCTCTTCAATGCCGGAACCCCGCA 700128
Query 259954 CCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTA 260013
||||| | | || ||||| || | |||||||||| || ||||| || |||||
Sbjct 700127 GCCGCAAATGGCTTCCTGCTTCCTCATTGACATGAAGGAGGACAGTATCGAAGGTATCTA 700068
Query 260014 TGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGC 260073
||||| || ||| || || | || || ||| | || || || |||||| || ||
Sbjct 700067 CGACACACTGAAGACCTGTGCTTTGATTTCAAAGACTGCTGGAGGAATCGGTCTTAACGT 700008
Query 260074 ACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCT 260133
||| | || ||| | || ||||| | || || ||||||||| |||||||| |
Sbjct 700007 CCACCGTATCCGTGCCACCGGATCCTACATTGCTGGAACCAACGGCTCCTCCAACGGAAT 699948
Query 260134 TGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
|| ||||||||||| || || ||| |||| || | || |||||||||
Sbjct 699947 CGTCCCCATGCTTCGTGTGTTCAACAACACTGCCAGATATGTCGACCAG 699899
>seq144
Length=62475
Score = 105 bits (116), Expect = 1e-16
Identities = 203/296 (69%), Gaps = 5/296 (2%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| | |||| | || || || || ||||| ||||| ||| | ||||
Sbjct 15029 GATCTGGCAAATGTACAAGAAAG-CTGAAGCTTCTTTCTGGACTGCCGAAGAGATTGACC 14971
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891
|| || | | ||||| ||| | ||||| || || ||||||
Sbjct 14970 TCTCTAAGGATATTCACGACTGGAACAACAGGCTCAATGACGATGAACGATTCTTCATCT 14911
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
|||||| | ||||| || ||||||| ||||||||||| ||||||||| |
Sbjct 14910 CCCACGTCTTGGCCTTCTT-CGCCGCCTCAGATGGCATCGTTAACGAGAACCTCCTTGAA 14852
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
|| || | || || ||||| |||| || || || | || || || ||||| |||
Sbjct 14851 CGTTTCAGCAACGAAGTCCAGGTGCCGGAAGCTCGATGCTTCTATGGCTTCCAAATCATG 14792
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
|| || || || ||||| ||||| ||||| ||||| ||||||||||| |||||||
Sbjct 14791 ATGGAGAATATTCACTCCGAAACATACTCTCTCCTCATCGACACCTATATCAAGGA 14736
Score = 87.8 bits (96), Expect = 3e-11
Identities = 178/259 (69%), Gaps = 4/259 (2%)
Strand=Plus/Minus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||| || || ||| |||||| | ||||| | | ||| | || || ||
Sbjct 14362 ATCATCACTGAAGCAGTCACCATCGAGCAGGAGTTCTTGACCGATGCCCTCCCCTGTGCC 14303
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| |||||||||| || | ||||||||||||||||||||| || |||||||| | |
Sbjct 14302 CTTCTCGGCATGAATGCTAA-GCTCATGTGCCAGTACATTGAGTTC-GTCGCCGATAGGC 14245
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
| |||| || || || | ||||| |||| || ||||||| ||| | |||
Sbjct 14244 TTCTCGTTGCTCTTGGTAACA-AGAAGTTCTACAACACCACCAACCCCTTCGACTTCATG 14186
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761
|| ||||| |||| |||||||||||||| |||||| || | ||| || |||
Sbjct 14185 GACAATATCTCCCTCGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGAGATTACCAG 14126
Query 1456762 AAGGCCGGCGTCACCGCCA 1456780
|| || || |||| ||||
Sbjct 14125 AAAGCTGGTGTCATGGCCA 14107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177786026070282
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |