Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq210 159 3e-34
>seq210
Length=1335347
Score = 159 bits (176), Expect = 3e-34
Identities = 183/243 (75%), Gaps = 5/243 (2%)
Strand=Plus/Minus
Query 35495 ATCATCTCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGA 35554
||||||| ||| || || || |||| || ||||||||| ||||| |||||||| ||
Sbjct 1131612 ATCATCTAGTTA---CCGCCTCGCAACCGCAGCACCAAATGCAACGTGCTCTCCTTCTGG 1131556
Query 35555 ATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGC 35614
||||| ||||||| || || || |||| || ||||| || || ||||| || | |||
Sbjct 1131555 ATGTTATAATCGGACAGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAGATGAGACGC 1131496
Query 35615 TGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGT 35673
|||||||| | |||| | ||||||||| ||||||| ||| | |||| | | |||
Sbjct 1131495 TGCTGGTCTGGCGGAATACCTTCCTTGTCCTGGATCTTTGTCTTGA-CGTTGTCTATCGT 1131437
Query 35674 GTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTG 35733
|||||| ||||| || |||| ||||| ||||| ||||||| || || || || |||||
Sbjct 1131436 GTCGCTGGATTCTACTTCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACGAAGATCTG 1131377
Query 35734 CAT 35736
|||
Sbjct 1131376 CAT 1131374
Score = 100 bits (110), Expect = 3e-16
Identities = 128/174 (74%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| |||||||| || |||||||| |||| | ||| || |||| || ||||| || ||
Sbjct 1131044 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGTTTTCCT 1130985
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659
|| || |||| ||||||||||| | || | || |||||||||| |||||| |||
Sbjct 1130984 GCGAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTG 1130925
Query 35660 AGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| |||| | | |||||||| || |||||||| | ||||| || || || ||
Sbjct 1130924 A-CGTTGTCAATAGTGTCGCTGGACTCCACCTCGAGGGTGATAGTCTTGCCAGT 1130872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450792129285880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |