Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq210 122 9e-23
seq104 91.5 1e-13
>seq210
Length=1335347
Score = 122 bits (134), Expect = 9e-23
Identities = 157/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | || || | || ||||| || || ||||||||||| |||||||||||
Sbjct 1131372 CCTCCACGCAGACGAAGGACAAGGTGGAGAGTTGATTCCTTTTGGATGTTGTAGTCCGAG 1131313
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| ||||||||||| |||||||| || | ||| ||||| || || ||
Sbjct 1131312 AGGGTCCGGCCGTCCTCGAGCTGTTTTCCTGCAAAGATGAGACGTTGCTGGTCTGGAGGG 1131253
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | |||||| ||||| ||
Sbjct 1131252 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGATTCGACC 1131193
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
|| ||||| ||||| || ||||| | |||||| ||||
Sbjct 1131192 TCAAGAGTGATGGTCTTGCCGGTCAGAGTTTTCACGA 1131156
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | |||||||| || ||| ||||| || ||||||||||||
Sbjct 1131074 CCACCACGGAGACGAAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 1131015
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| ||||||||||| ||||| || |||| |||||||| || || ||
Sbjct 1131014 AGGGTGCGGCCGTCCTCGAGCTGTTTTCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGG 1130955
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | |||||| || |||||
Sbjct 1130954 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCAATAGTGTCGCTGGACTCCACC 1130895
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
||||| || || || || || ||
Sbjct 1130894 TCGAGGGTGATAGTCTTGCCAGT 1130872
>seq104
Length=3444964
Score = 91.5 bits (100), Expect = 1e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||||||||| || ||||| ||||| |||||||||||||| |
Sbjct 1585624 CCACCACGGAGACGGAGCACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAA 1585683
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| || |||||||| ||||| || |||| ||||||||| || || ||
Sbjct 1585684 AGAGTACGGCCGTCCTCAAGCTGTTTTCCTGCGAAGATCAGACGCTGCTGGTCTGGGGGA 1585743
Query 134607 ATGCCTTCTTTTTCT 134621
|| || || || |||
Sbjct 1585744 ATTCCCTCCTTGTCT 1585758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505396751137720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |