Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq241 223 5e-53
seq144 93.3 6e-14
>seq241
Length=1026449
Score = 223 bits (246), Expect = 5e-53
Identities = 592/898 (66%), Gaps = 10/898 (1%)
Strand=Plus/Plus
Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576
||||| || ||||| | |||||| ||||||||||| ||||| || || | | | |
Sbjct 699660 TCGAACTCTTCTCCGTAGACATCAGCCAATCCAGGAGCCTCATTAGGGCAGAATAGGGTC 699719
Query 69577 CACACATCATCATCCTT---AACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA 69633
|| ||| ||| ||| |||||| ||||| || | ||| ||| |||| | || |
Sbjct 699720 CA---ATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAGTCCACAAGGCCAAG 699776
Query 69634 AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCC 69693
|| ||||| | || | |||||| ||||| || || || || || |||||
Sbjct 699777 AATAGATCACGGGCACGGACTTCTTCCTTTCCATGGTTCTTGCGGAGGTCAAGGAACTCA 699836
Query 69694 ATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCT 69753
| ||||||| |||||||| || || || || || | | | || || || || || ||
Sbjct 699837 AAGATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCTGGACGCTTGTTGCCA 699896
Query 69754 CCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTA 69813
||||| || | |||||||||||||| || | || | ||||| || | || || ||
Sbjct 699897 CCCTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGGACGATTCCGTTG 699956
Query 69814 GATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGA 69873
|| || || ||||||| ||| || ||| | || || ||| | |||
Sbjct 699957 GAGGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGATACGGTGGACGTTAAGA 700016
Query 69874 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCC 69933
|| |||||||| || | || || || | |||||| |||| |||||| || |||||
Sbjct 700017 CCGATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCTTCAGTGTGTCGTAGATACCT 700076
Query 69934 TCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTT 69993
|| || || || || |||||| || || || ||| || |||||| | || |||
Sbjct 700077 TCGATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGGCTGCGGGGTT 700136
Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053
|| ||||| || | || ||||| || || ||||| |||| | || | |||||||||
Sbjct 700137 CCGGCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTCTGGGACATGAGATTGTAT 700196
Query 70054 GTTTCAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACAT 70112
|||||||| || || | ||| ||| | || || || | || || ||||| | |||
Sbjct 700197 GTTTCAATTACTTTCTCAACGTCCTCACCG-TGGATACCGACGGCAACTCGCATTATCAT 700255
Query 70113 ATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGT 70172
|||||| || ||||| | || || || | ||||||||| |||| || ||
Sbjct 700256 ATGCTGTGGCCGTTCAGCAACCTTGCCGTTGGTTCGTAGCAGGTATGACCTTTCAAGCGT 700315
Query 70173 TTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTT 70232
|| || || ||||| | ||| |||||| | ||||| | |||| | || || ||||
Sbjct 700316 CTTGAAGCCGAAATACTGGTAGTTAAAGTCACGGTCGTACACAATAGCCGAGTTGAGTTC 700375
Query 70233 ATCCTTATATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACC 70292
|| || ||| | || || ||| | | || || || |||| | | ||
Sbjct 700376 TTCAGCATGTTTCATGACGATCTCCCGAGTCTTCTCGGATATCATGGGAGCTGGCCGGCC 700435
Query 70293 ATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTA-AATAGtttttttG 70351
|| ||||| ||||| |||| | | || || || || || | ||| | || || |
Sbjct 700436 GTTCTTAGGGTTAACGTAGTGATAGAGGTCATCTATAAC-GGACGAGAATTGCTTCTTGG 700494
Query 70352 TTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409
||| ||||| | || || | |||||||| || || ||||| |||||||| |||||
Sbjct 700495 TTTGTTTGTGGAGGTTCGACACTGCTATTCTTGCAGCAAGAATGGCATAGTCTGGATG 700552
>seq144
Length=62475
Score = 93.3 bits (102), Expect = 6e-14
Identities = 154/219 (70%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667
|||| | |||||| || ||| |||||||| || || | || | |||||| ||
Sbjct 14406 AACAGAAGGCAGGCAAAATCAGTGTGTAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAG 14465
Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727
|| |||||||| ||||| ||||||||||| || ||||| || |||| || || || ||
Sbjct 14466 AAGGTGAGTCCGGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAGCCG 14525
Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA 39787
||||| || || || || || ||||| |||||||| | || | || | | | ||
Sbjct 14526 CTGAAGAAAATACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGTGCGAATGTGGAATTC 14585
Query 39788 TTA---TGTATCCA-CTTCTGTGCCCAATCAGCTTTCTT 39822
||| || ||||| | || |||||||| || |||||
Sbjct 14586 TTATCTTGGATCCATCGAATG-GCCCAATCGGCCTTCTT 14623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686906558960040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |