Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 >seq1 Length=4062027 Score = 91.5 bits (100), Expect = 1e-13 Identities = 226/343 (66%), Gaps = 9/343 (3%) Strand=Plus/Plus Query 19552 CACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGA------GGTTC---T 19602 |||||||| || | ||||||||||| || | || || |||||| ||| | | Sbjct 1977176 CACATTATCATTTTTGATGAATTGGATGCTGTTTGCAAACAAAGAGGCAGCGGTGCCGGT 1977235 Query 19603 GGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTT 19662 |||| || || || || | ||||||||| ||||| || ||||| | ||||||||| Sbjct 1977236 GGTGGAACGGGTGTTGGCGATAGTGTTGTCAACCAACTTCTATCAAAGCTCGACGGTGTT 1977295 Query 19663 AACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGC 19722 |||| || || ||||| | |||| || ||||| || || |||| | || || Sbjct 1977296 GACCAGCTAAACAATATCCTCCTTATAGGAATGACAAACCGAATGGACATGATTGATGAT 1977355 Query 19723 GCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGT 19782 ||| || | || || ||||| |||| | | || ||||| | | || |||||| | Sbjct 1977356 GCCCTACTGCGTCCAGGTCGACTGGAGGTCCATATGGAAATATCCCTCCCAGATGAACAT 1977415 Query 19783 GGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTTAAAT 19842 || || | |||| || || || ||||| | |||||| | || || || | | Sbjct 1977416 GGCCGGGCTCAAATATTGAAAATCCATACCCAGAAAATGCGAGAGAACGACGTTATGGAC 1977475 Query 19843 GACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACT 19885 || || ||||| | || ||||||| |||||| |||| Sbjct 1977476 CGAGACGTGGATCTCAAGGAGCTTGCAGCACTTACCAAGAACT 1977518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397454735717305