Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq241 149 8e-31 seq144 98.7 1e-15 >seq241 Length=1026449 Score = 149 bits (164), Expect = 8e-31 Identities = 680/1065 (64%), Gaps = 20/1065 (2%) Strand=Plus/Plus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 |||||||||||||| ||||||||||| || | ||||| | | |||||| | | Sbjct 698480 CGGAGATAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATACTGGTG 698539 Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAG 110482 | ||| ||| || || || || | || ||| | |||| |||||||||||| Sbjct 698540 ATCTTTCCCATGGTAGGCTCTTTCAAGTGGATGTTGAGGGATTGAGACTGGTCAATGAAG 698599 Query 110483 CGCCCCCGTTGTGCCGCCATATCAATGACAT--CCTTCATCTTAATTTCCCAAACTGTGC 110540 || || | || ||||| | || | | | || | ||||||||| || || Sbjct 698600 GCGCCTCGATCAGCGGCCATCTGAACAATAGTACGTTGAGA--AATTTCCCACACGGTCT 698657 Query 110541 GATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCT 110600 || ||| |||||| || ||||||| | ||||| || ||||||||||| || | Sbjct 698658 TGTACAGAGCCTTGATGTCTGCTGGGATGTTAGAGATGTTTTGGATGGAACCACCGTCGG 698717 Query 110601 TCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGA 110660 | || | | ||||||| | |||||| || || | | ||||| |||| | Sbjct 698718 CGATGATACGGTTTTTCATATTGTCGGACCACAGGCCGAGGTCGACCAGGTCTTTGAGAA 698777 Query 110661 GGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTG 110720 | |||||||| ||||| || || || | | ||||||||| | | Sbjct 698778 GCCATGGGTTGACAACTTGGAACTCGCCAGCAAGTACACGGCGTGAGTAGATGTTGGAGG 698837 Query 110721 TGTATGGTTCAAAGCATTCATTATTACCCAAGATT-TGTGCGGTGGAGGCTGTTGGCATT 110779 |||| ||||||||||| || || | |||||| | || |||| ||| |||||||| Sbjct 698838 TGTAAGGTTCAAAGCACTCGTTGA-AGCCAAGAATCTGACTGGTGCTGGCAGTTGGCATG 698896 Query 110780 GGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCC 110839 || || | | | |||||||| | ||| | || ||| | || ||| ||||| Sbjct 698897 GGCGCAAGTAGTAAGCTGTTACGGACACCGTGCTTGGAGATCTCAGCTTTAAGACCATCC 698956 Query 110840 CAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGA 110898 ||||| || | | | || | || |||| |||| || | ||||| | || || || Sbjct 698957 CAGTCCCAGAGGTCGGTCGGCGTTACGTTCC-ACATATCGTATTGAAGAATACCCTGAGA 699015 Query 110899 CGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGC 110958 | |||||||||||| ||| || | ||| | | | | || | |||||| || Sbjct 699016 AACAGGAGAACCCTCATAGGAGGAGTATGGACCATCGACCTTGGCAAGTTCACACGATGC 699075 Query 110959 CTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATC 111018 || | || || || | ||| || ||||| | | |||| ||||||||| Sbjct 699076 GGTCAACGCAGCATGGTAAAGGGTCTCGAAGATTTGGGTGTTCAAAAGCTTGGCTTCGGG 699135 Query 111019 TGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAAC 111077 || || || | | || | | | | || |||| || || || || || |||| | Sbjct 699136 AGAGTCGAAGG-GCAGTCGAAGAGCGAGGAAAGCATCGGCAAGGCCCTGGACCCCCACAG 699194 Query 111078 CAATAGGTCTGTGTCGCATATTAGACTT--TCGCGCAGTCTCAACGGGATAAAAATTTCT 111135 |||| || | || || | ||| ||| ||| || ||||| || || || | Sbjct 699195 CAATGGGGCGATGACGGAAATTG--CTTCGTCGTGCCTCTTCAACCGGGTAGTGGTTCCC 699252 Query 111136 GTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA 111195 |||||||| || ||| | ||| || ||| | || |||| |||||| ||||| || | Sbjct 699253 GTCAATGATTCTGTTCAAGTTTCTGACAACGACCTGAGTGACTTCATGGAGTTTGCCAAA 699312 Query 111196 ATCAAA---AGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 111252 ||| | | |||| | ||| ||| | | |||||||| || || ||||| || Sbjct 699313 ATCGTATTCACCGCGAA---CAGCATCCACAAAGGTAGGAAGGGCAATAGAAGCCAAGTT 699369 Query 111253 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACT 111312 ||||| || |||||| | ||||| || | ||||| || || | ||| ||||| Sbjct 699370 ACAAACTGCAACCTCATCTGGGGCGGTGTATTCAACGATTTCAGTGCAAAGGTTTGAACT 699429 Query 111313 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCAT 111372 || || || | |||||||| || ||||| |||||| | ||||||||| ||||| Sbjct 699430 ACGGATAGTACCAAGGTTCTTTTGATTGCTCTTTCGGTTGCAGGAATCCTTGTAAAGCAT 699489 Query 111373 GTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 |||| | || ||||||||||| | | |||||| || | ||| Sbjct 699490 AAAGGGGTTTCCAGTCTCCGTCTGGGCCTCGAGAATGGCGTACCA 699534 >seq144 Length=62475 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| || || || || ||||| || ||||| || |||||| || || Sbjct 14417 GGCAAAATCAGTGTGTAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCC 14476 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 ||||||||||| |||||||||| ||| | || | | ||| || ||| |||||| || Sbjct 14477 GGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAAAT 14536 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAA 122837 |||||| || ||||| |||| |||||| | ||||| | | | ||| | | | Sbjct 14537 ACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGTGCGAATGTGGAATTCTTATCTTGGAT 14596 Query 122838 CCATTTCATTGCCCATTTCGCCTTCTT 122864 |||| || ||||| | |||||||| Sbjct 14597 CCATCGAATGGCCCAATCGGCCTTCTT 14623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029951045600