Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq241 149 8e-31
seq144 98.7 1e-15
>seq241
Length=1026449
Score = 149 bits (164), Expect = 8e-31
Identities = 680/1065 (64%), Gaps = 20/1065 (2%)
Strand=Plus/Plus
Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422
|||||||||||||| ||||||||||| || | ||||| | | |||||| | |
Sbjct 698480 CGGAGATAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATACTGGTG 698539
Query 110423 AGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAG 110482
| ||| ||| || || || || | || ||| | |||| ||||||||||||
Sbjct 698540 ATCTTTCCCATGGTAGGCTCTTTCAAGTGGATGTTGAGGGATTGAGACTGGTCAATGAAG 698599
Query 110483 CGCCCCCGTTGTGCCGCCATATCAATGACAT--CCTTCATCTTAATTTCCCAAACTGTGC 110540
|| || | || ||||| | || | | | || | ||||||||| || ||
Sbjct 698600 GCGCCTCGATCAGCGGCCATCTGAACAATAGTACGTTGAGA--AATTTCCCACACGGTCT 698657
Query 110541 GATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCT 110600
|| ||| |||||| || ||||||| | ||||| || ||||||||||| || |
Sbjct 698658 TGTACAGAGCCTTGATGTCTGCTGGGATGTTAGAGATGTTTTGGATGGAACCACCGTCGG 698717
Query 110601 TCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGA 110660
| || | | ||||||| | |||||| || || | | ||||| |||| |
Sbjct 698718 CGATGATACGGTTTTTCATATTGTCGGACCACAGGCCGAGGTCGACCAGGTCTTTGAGAA 698777
Query 110661 GGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTG 110720
| |||||||| ||||| || || || | | ||||||||| | |
Sbjct 698778 GCCATGGGTTGACAACTTGGAACTCGCCAGCAAGTACACGGCGTGAGTAGATGTTGGAGG 698837
Query 110721 TGTATGGTTCAAAGCATTCATTATTACCCAAGATT-TGTGCGGTGGAGGCTGTTGGCATT 110779
|||| ||||||||||| || || | |||||| | || |||| ||| ||||||||
Sbjct 698838 TGTAAGGTTCAAAGCACTCGTTGA-AGCCAAGAATCTGACTGGTGCTGGCAGTTGGCATG 698896
Query 110780 GGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCC 110839
|| || | | | |||||||| | ||| | || ||| | || ||| |||||
Sbjct 698897 GGCGCAAGTAGTAAGCTGTTACGGACACCGTGCTTGGAGATCTCAGCTTTAAGACCATCC 698956
Query 110840 CAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGA 110898
||||| || | | | || | || |||| |||| || | ||||| | || || ||
Sbjct 698957 CAGTCCCAGAGGTCGGTCGGCGTTACGTTCC-ACATATCGTATTGAAGAATACCCTGAGA 699015
Query 110899 CGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGC 110958
| |||||||||||| ||| || | ||| | | | | || | |||||| ||
Sbjct 699016 AACAGGAGAACCCTCATAGGAGGAGTATGGACCATCGACCTTGGCAAGTTCACACGATGC 699075
Query 110959 CTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATC 111018
|| | || || || | ||| || ||||| | | |||| |||||||||
Sbjct 699076 GGTCAACGCAGCATGGTAAAGGGTCTCGAAGATTTGGGTGTTCAAAAGCTTGGCTTCGGG 699135
Query 111019 TGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAAC 111077
|| || || | | || | | | | || |||| || || || || || |||| |
Sbjct 699136 AGAGTCGAAGG-GCAGTCGAAGAGCGAGGAAAGCATCGGCAAGGCCCTGGACCCCCACAG 699194
Query 111078 CAATAGGTCTGTGTCGCATATTAGACTT--TCGCGCAGTCTCAACGGGATAAAAATTTCT 111135
|||| || | || || | ||| ||| ||| || ||||| || || || |
Sbjct 699195 CAATGGGGCGATGACGGAAATTG--CTTCGTCGTGCCTCTTCAACCGGGTAGTGGTTCCC 699252
Query 111136 GTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA 111195
|||||||| || ||| | ||| || ||| | || |||| |||||| ||||| || |
Sbjct 699253 GTCAATGATTCTGTTCAAGTTTCTGACAACGACCTGAGTGACTTCATGGAGTTTGCCAAA 699312
Query 111196 ATCAAA---AGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 111252
||| | | |||| | ||| ||| | | |||||||| || || ||||| ||
Sbjct 699313 ATCGTATTCACCGCGAA---CAGCATCCACAAAGGTAGGAAGGGCAATAGAAGCCAAGTT 699369
Query 111253 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACT 111312
||||| || |||||| | ||||| || | ||||| || || | ||| |||||
Sbjct 699370 ACAAACTGCAACCTCATCTGGGGCGGTGTATTCAACGATTTCAGTGCAAAGGTTTGAACT 699429
Query 111313 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCAT 111372
|| || || | |||||||| || ||||| |||||| | ||||||||| |||||
Sbjct 699430 ACGGATAGTACCAAGGTTCTTTTGATTGCTCTTTCGGTTGCAGGAATCCTTGTAAAGCAT 699489
Query 111373 GTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417
|||| | || ||||||||||| | | |||||| || | |||
Sbjct 699490 AAAGGGGTTTCCAGTCTCCGTCTGGGCCTCGAGAATGGCGTACCA 699534
>seq144
Length=62475
Score = 98.7 bits (108), Expect = 1e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717
|||||| || ||| || || || || ||||| || ||||| || |||||| || ||
Sbjct 14417 GGCAAAATCAGTGTGTAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCC 14476
Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777
||||||||||| |||||||||| ||| | || | | ||| || ||| |||||| ||
Sbjct 14477 GGGCATGAGACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAAAT 14536
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAA 122837
|||||| || ||||| |||| |||||| | ||||| | | | ||| | | |
Sbjct 14537 ACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGTGCGAATGTGGAATTCTTATCTTGGAT 14596
Query 122838 CCATTTCATTGCCCATTTCGCCTTCTT 122864
|||| || ||||| | ||||||||
Sbjct 14597 CCATCGAATGGCCCAATCGGCCTTCTT 14623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628029951045600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |