Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq241 132 6e-26
seq144 122 1e-22
>seq241
Length=1026449
Score = 132 bits (146), Expect = 6e-26
Identities = 680/1069 (64%), Gaps = 28/1069 (3%)
Strand=Plus/Plus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
||||| |||||||| || |||||||| || |||||||| || | ||||| ||
Sbjct 698480 CGGAGATAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATACTGGTG 698539
Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956
| ||| | ||| || || || | || ||| | ||| || || || ||||||
Sbjct 698540 ATCTTTCCCATGGTAGGCTCTTTCAAGTGGATGTTGAGGGATTGAGACTGGTCAATGAAG 698599
Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCC 118014
|| ||||| || ||||| | || || || | | | || |||||||||| |||
Sbjct 698600 GCGCCTCGATCAGCGGCCATCTGAA-CA-ATAGTACGTTGAGAAATTTCCCACACGGTCT 698657
Query 118015 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCT 118074
|||| || ||| || || ||||||| | ||| ||||||||||| ||||| |
Sbjct 698658 TGTACAGAGCCTTGATGTCTGCTGGGATGTTAGAGATGTTTTGGATGGAACCACCGTCGG 698717
Query 118075 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 118134
|| || | | ||||||| | ||||| || || | | || || | | |
Sbjct 698718 CGATGATACGGTTTTTCATATTGTCGGACCACAGGCCGAGGTCGACCAGGTCTTTGAGAA 698777
Query 118135 G--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATATTGG 118191
| ||| | ||||||| ||||| || || || || | | || ||||| ||||
Sbjct 698778 GCCATGGGT--TGACAACTTGGAACTCGCCAGCAAGTACACGGCGTGAG-TAGATGTTGG 698834
Query 118192 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG-TGGAGGCTGTGGGC 118250
||||| || ||||||||||| ||| | |||||| | | ||| || ||| || |||
Sbjct 698835 AGGTGTAAGGTTCAAAGCACTCGTTGA-AGCCAAGAATCTGACTGGTGCTGGCAGTTGGC 698893
Query 118251 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCG 118310
||||| || | || | ||||||||||| ||| | | || | || ||| |
Sbjct 698894 ATGGGCGCAAGTAGTAAGCTGTTACGGACACCGTGCTTGGAGATCTCAGCTTTAAGACCA 698953
Query 118311 TCCCAGTCGTAGTTGAGCTTTGTCTCCC---CCTGCCACATATCAAACTGGAGGATACCT 118367
|||||||| || || | ||| | | | ||||||||| | || || |||||
Sbjct 698954 TCCCAGTCCCAG---AGGTCGGTCGGCGTTACGTTCCACATATCGTATTGAAGAATACCC 699010
Query 118368 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAG 118427
|| || | || || |||||| | | ||||| || || |||| || | ||| |
Sbjct 699011 TGAGAAACAGGAGAACCCTCATAGGAGGAGTATGGACCATCGACCTTGGCAAGTTCACAC 699070
Query 118428 CTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCC 118487
|| | || || || || | || || || || | | |||| ||||||
Sbjct 699071 GATGCGGTCAACGCAGCATGGTAAAGGGTCTCGAAGATTTGGGTGTTCAAAAGCTTGGCT 699130
Query 118488 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 118547
||| || || || | ||||| | || |||| || || || ||||| ||
Sbjct 699131 TCGGGAGAGTCGAAGGGCAGTCGAAGAGCGAGGAAAGCATCGGCAAGGCCCTGGACCCCC 699190
Query 118548 AGGCCAATTGGGCGATGTCTCATATTAGACTTC--CGAGCGGTCTCCACGGGATAAAAAT 118605
| |||| |||||||| | | ||| |||| || || || || || || |
Sbjct 699191 ACAGCAATGGGGCGATGACGGAAATTG--CTTCGTCGTGCCTCTTCAACCGGGTAGTGGT 699248
Query 118606 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 118665
||| || || | || || | ||| || || |||| |||| |||||| || ||
Sbjct 699249 TCCCGTCAATGATTCTGTTCAAGTTTCTGACAACGACCTGAGTGACTTCATGGAGTTTGC 699308
Query 118666 CGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 118722
| |||| | || |||| | ||| ||| | |||||||||| || || ||||
Sbjct 699309 CAAAATCGTATTCACCGCGAA---CAGCATCCACAAAGGTAGGAAGGGCAATAGAAGCCA 699365
Query 118723 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTG 118782
||||| || | |||||| | ||||| || | ||||| ||||| | |||||
Sbjct 699366 AGTTACAAACTGCAACCTCATCTGGGGCGGTGTATTCAACGATTTCAGTGCAAAGGTTTG 699425
Query 118783 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAA 118842
|||| || || || | |||||||||||| |||| ||| || | |||||||||||
Sbjct 699426 AACTACGGATAGTACCAAGGTTCTTTTGATTGCTCTTTCGGTTGCAGGAATCCTTGTAAA 699485
Query 118843 GCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891
|||| | || | || |||||||| |||| || |||||| || | |||
Sbjct 699486 GCATAAAGGGGTTTCCAGTCTCCGTCTGGGCCTCGAGAATGGCGTACCA 699534
Score = 127 bits (140), Expect = 3e-24
Identities = 401/617 (65%), Gaps = 11/617 (2%)
Strand=Plus/Plus
Query 118939 ACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTAT 118998
||||| ||| | || || |||||||| || | | || | | || || |||| ||
Sbjct 699643 ACTTTTCGTACAATGCCTCGAACTCTTCTCCGTAGACATCAGCCAATCCAGGAGCCTCAT 699702
Query 118999 CTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGA 119058
|||||||| || | ||| | ||| || ||||| ||||||||||| | || ||
Sbjct 699703 TAGGGCAGAATAGGGTCCAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAG 699762
Query 119059 TCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCA 119118
|||| | ||| |||| ||||| || || ||||||| | || || || || |
Sbjct 699763 TCCACAAGGCCAAGAATAGATCACGGGCACGGACTTCTTCCTTTCCATGGTTCTTGCGGA 699822
Query 119119 ACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCT 119178
|| | || || | |||||| |||||||| || |||||||| | || | | | |||
Sbjct 699823 GGTCAAGGAACTCAAAGATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGG-CACCT 699881
Query 119179 TACGACGA------CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCA 119232
|||| ||| |||||| ||||| || |||||| ||| || ||||||||||
Sbjct 699882 G--GACGCTTGTTGCCACCCTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCA 699939
Query 119233 TTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGA 119292
| || | ||| || | ||| ||| || || || ||| || |||| | ||
Sbjct 699940 TGGGGACGATTCCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGA 699999
Query 119293 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 119352
| ||||| || | ||| || || || || |||||| || || || | | |
Sbjct 700000 TACGGTGGACGTTAAGACCGATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCTTCA 700059
Query 119353 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 119412
| || ||||||| || ||||| ||| |||| | | |||||||||||| | ||
Sbjct 700060 GTGTGTCGTAGATACCTTCGATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCA 700119
Query 119413 TTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA-CATACCT 119471
|||| ||| || || || || ||||||||||| || | || ||| |||| || |
Sbjct 700120 TTTGCGGCTGCGGGGTTCCGGCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTC- 700178
Query 119472 TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATC 119531
|||||||| | ||| || || | || || ||| || ||||| |||||||
Sbjct 700179 TGGGACATGAGATTGTATGTTTCAATTACTTTCTCAACGTCCTCACCGTGGATACCGACG 700238
Query 119532 GAGACCCGCATAAACAT 119548
| || ||||| | |||
Sbjct 700239 GCAACTCGCATTATCAT 700255
>seq144
Length=62475
Score = 122 bits (134), Expect = 1e-22
Identities = 295/443 (67%), Gaps = 8/443 (2%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
|| || ||||| ||||||||||||||||| ||||| || | | | |||||| |||||
Sbjct 14130 TAATCTCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGGGAGATATTGTCCATG 14189
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCA-AATTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| || || ||||| | | ||| | || | || | |||| ||| || |
Sbjct 14190 AAGTCGAAGGGGTTGGTGGTGTTGTAGAACTTCTTGTTA-CCAAGAGCAACGAGAAGCCT 14248
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
||| | |||| |||||||||||| |||| || | ||||| |||| ||| |||
Sbjct 14249 ATCGGCGACGAACTCAATGTACTGGCACATGAGCTTAGCATTCATGCCGAGAAGGGCACA 14308
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
||||| || || | |||| ||| ||| ||| || ||||| | |||||| |
Sbjct 14309 GGGGAGGGCATCGGTCAAGAACTCCTGCTCGATGGTGACTGCTTCAGTGATGATGGCCTC 14368
Query 129967 AATGGTCTCCGTGCCAGGTCTAT---TGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023
|| | | | |||| | || || | || ||| || |||||| ||
Sbjct 14369 AACAGCACTGGGGTCAGGACGATAGTTGAGGTGAGA---GAACAGAAGGCAGGCAAAATC 14425
Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083
||| || || |||||||||||||||||||| || |||||| || || ||||||||
Sbjct 14426 AGTGTGTAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGGCATGAG 14485
Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143
||| |||||||||| |||||| || | || ||||| |||||| || ||||| ||
Sbjct 14486 ACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAAATACCCTCGAC 14545
Query 130144 ACACGCGAACGCAAAGAGACGCT 130166
|| || |||| || ||||
Sbjct 14546 GGCAGCAAAGGCAACAAGGCGCT 14568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618433182355160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |