Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05- 19] 261 sequences; 23,367,123 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq241 132 6e-26 seq144 122 1e-22 >seq241 Length=1026449 Score = 132 bits (146), Expect = 6e-26 Identities = 680/1069 (64%), Gaps = 28/1069 (3%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 ||||| |||||||| || |||||||| || |||||||| || | ||||| || Sbjct 698480 CGGAGATAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATACTGGTG 698539 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | ||| | ||| || || || | || ||| | ||| || || || |||||| Sbjct 698540 ATCTTTCCCATGGTAGGCTCTTTCAAGTGGATGTTGAGGGATTGAGACTGGTCAATGAAG 698599 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCC 118014 || ||||| || ||||| | || || || | | | || |||||||||| ||| Sbjct 698600 GCGCCTCGATCAGCGGCCATCTGAA-CA-ATAGTACGTTGAGAAATTTCCCACACGGTCT 698657 Query 118015 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCT 118074 |||| || ||| || || ||||||| | ||| ||||||||||| ||||| | Sbjct 698658 TGTACAGAGCCTTGATGTCTGCTGGGATGTTAGAGATGTTTTGGATGGAACCACCGTCGG 698717 Query 118075 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 118134 || || | | ||||||| | ||||| || || | | || || | | | Sbjct 698718 CGATGATACGGTTTTTCATATTGTCGGACCACAGGCCGAGGTCGACCAGGTCTTTGAGAA 698777 Query 118135 G--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATATTGG 118191 | ||| | ||||||| ||||| || || || || | | || ||||| |||| Sbjct 698778 GCCATGGGT--TGACAACTTGGAACTCGCCAGCAAGTACACGGCGTGAG-TAGATGTTGG 698834 Query 118192 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG-TGGAGGCTGTGGGC 118250 ||||| || ||||||||||| ||| | |||||| | | ||| || ||| || ||| Sbjct 698835 AGGTGTAAGGTTCAAAGCACTCGTTGA-AGCCAAGAATCTGACTGGTGCTGGCAGTTGGC 698893 Query 118251 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCG 118310 ||||| || | || | ||||||||||| ||| | | || | || ||| | Sbjct 698894 ATGGGCGCAAGTAGTAAGCTGTTACGGACACCGTGCTTGGAGATCTCAGCTTTAAGACCA 698953 Query 118311 TCCCAGTCGTAGTTGAGCTTTGTCTCCC---CCTGCCACATATCAAACTGGAGGATACCT 118367 |||||||| || || | ||| | | | ||||||||| | || || ||||| Sbjct 698954 TCCCAGTCCCAG---AGGTCGGTCGGCGTTACGTTCCACATATCGTATTGAAGAATACCC 699010 Query 118368 TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAG 118427 || || | || || |||||| | | ||||| || || |||| || | ||| | Sbjct 699011 TGAGAAACAGGAGAACCCTCATAGGAGGAGTATGGACCATCGACCTTGGCAAGTTCACAC 699070 Query 118428 CTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCC 118487 || | || || || || | || || || || | | |||| |||||| Sbjct 699071 GATGCGGTCAACGCAGCATGGTAAAGGGTCTCGAAGATTTGGGTGTTCAAAAGCTTGGCT 699130 Query 118488 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 118547 ||| || || || | ||||| | || |||| || || || ||||| || Sbjct 699131 TCGGGAGAGTCGAAGGGCAGTCGAAGAGCGAGGAAAGCATCGGCAAGGCCCTGGACCCCC 699190 Query 118548 AGGCCAATTGGGCGATGTCTCATATTAGACTTC--CGAGCGGTCTCCACGGGATAAAAAT 118605 | |||| |||||||| | | ||| |||| || || || || || || | Sbjct 699191 ACAGCAATGGGGCGATGACGGAAATTG--CTTCGTCGTGCCTCTTCAACCGGGTAGTGGT 699248 Query 118606 TCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTT 118665 ||| || || | || || | ||| || || |||| |||| |||||| || || Sbjct 699249 TCCCGTCAATGATTCTGTTCAAGTTTCTGACAACGACCTGAGTGACTTCATGGAGTTTGC 699308 Query 118666 CGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 118722 | |||| | || |||| | ||| ||| | |||||||||| || || |||| Sbjct 699309 CAAAATCGTATTCACCGCGAA---CAGCATCCACAAAGGTAGGAAGGGCAATAGAAGCCA 699365 Query 118723 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTG 118782 ||||| || | |||||| | ||||| || | ||||| ||||| | ||||| Sbjct 699366 AGTTACAAACTGCAACCTCATCTGGGGCGGTGTATTCAACGATTTCAGTGCAAAGGTTTG 699425 Query 118783 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAA 118842 |||| || || || | |||||||||||| |||| ||| || | ||||||||||| Sbjct 699426 AACTACGGATAGTACCAAGGTTCTTTTGATTGCTCTTTCGGTTGCAGGAATCCTTGTAAA 699485 Query 118843 GCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891 |||| | || | || |||||||| |||| || |||||| || | ||| Sbjct 699486 GCATAAAGGGGTTTCCAGTCTCCGTCTGGGCCTCGAGAATGGCGTACCA 699534 Score = 127 bits (140), Expect = 3e-24 Identities = 401/617 (65%), Gaps = 11/617 (2%) Strand=Plus/Plus Query 118939 ACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTAT 118998 ||||| ||| | || || |||||||| || | | || | | || || |||| || Sbjct 699643 ACTTTTCGTACAATGCCTCGAACTCTTCTCCGTAGACATCAGCCAATCCAGGAGCCTCAT 699702 Query 118999 CTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGA 119058 |||||||| || | ||| | ||| || ||||| ||||||||||| | || || Sbjct 699703 TAGGGCAGAATAGGGTCCAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAG 699762 Query 119059 TCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCA 119118 |||| | ||| |||| ||||| || || ||||||| | || || || || | Sbjct 699763 TCCACAAGGCCAAGAATAGATCACGGGCACGGACTTCTTCCTTTCCATGGTTCTTGCGGA 699822 Query 119119 ACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCT 119178 || | || || | |||||| |||||||| || |||||||| | || | | | ||| Sbjct 699823 GGTCAAGGAACTCAAAGATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGG-CACCT 699881 Query 119179 TACGACGA------CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCA 119232 |||| ||| |||||| ||||| || |||||| ||| || |||||||||| Sbjct 699882 G--GACGCTTGTTGCCACCCTGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCA 699939 Query 119233 TTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGA 119292 | || | ||| || | ||| ||| || || || ||| || |||| | || Sbjct 699940 TGGGGACGATTCCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGA 699999 Query 119293 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 119352 | ||||| || | ||| || || || || |||||| || || || | | | Sbjct 700000 TACGGTGGACGTTAAGACCGATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCTTCA 700059 Query 119353 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 119412 | || ||||||| || ||||| ||| |||| | | |||||||||||| | || Sbjct 700060 GTGTGTCGTAGATACCTTCGATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCA 700119 Query 119413 TTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA-CATACCT 119471 |||| ||| || || || || ||||||||||| || | || ||| |||| || | Sbjct 700120 TTTGCGGCTGCGGGGTTCCGGCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTC- 700178 Query 119472 TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATC 119531 |||||||| | ||| || || | || || ||| || ||||| ||||||| Sbjct 700179 TGGGACATGAGATTGTATGTTTCAATTACTTTCTCAACGTCCTCACCGTGGATACCGACG 700238 Query 119532 GAGACCCGCATAAACAT 119548 | || ||||| | ||| Sbjct 700239 GCAACTCGCATTATCAT 700255 >seq144 Length=62475 Score = 122 bits (134), Expect = 1e-22 Identities = 295/443 (67%), Gaps = 8/443 (2%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || ||||| ||||||||||||||||| ||||| || | | | |||||| ||||| Sbjct 14130 TAATCTCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCGAGGGAGATATTGTCCATG 14189 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCA-AATTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | | ||| | || | || | |||| ||| || | Sbjct 14190 AAGTCGAAGGGGTTGGTGGTGTTGTAGAACTTCTTGTTA-CCAAGAGCAACGAGAAGCCT 14248 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||| | |||| |||||||||||| |||| || | ||||| |||| ||| ||| Sbjct 14249 ATCGGCGACGAACTCAATGTACTGGCACATGAGCTTAGCATTCATGCCGAGAAGGGCACA 14308 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 ||||| || || | |||| ||| ||| ||| || ||||| | |||||| | Sbjct 14309 GGGGAGGGCATCGGTCAAGAACTCCTGCTCGATGGTGACTGCTTCAGTGATGATGGCCTC 14368 Query 129967 AATGGTCTCCGTGCCAGGTCTAT---TGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023 || | | | |||| | || || | || ||| || |||||| || Sbjct 14369 AACAGCACTGGGGTCAGGACGATAGTTGAGGTGAGA---GAACAGAAGGCAGGCAAAATC 14425 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| || || |||||||||||||||||||| || |||||| || || |||||||| Sbjct 14426 AGTGTGTAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGGCATGAG 14485 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 ||| |||||||||| |||||| || | || ||||| |||||| || ||||| || Sbjct 14486 ACCACGCTTCTTCAGCCAGAAGATGGAGGCGAAGGAGCCGCTGAAGAAAATACCCTCGAC 14545 Query 130144 ACACGCGAACGCAAAGAGACGCT 130166 || || |||| || |||| Sbjct 14546 GGCAGCAAAGGCAACAAGGCGCT 14568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433182355160