Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq241 152 6e-32
seq144 104 3e-17
seq1 95.1 1e-14
>seq241
Length=1026449
Score = 152 bits (168), Expect = 6e-32
Identities = 470/717 (66%), Gaps = 14/717 (2%)
Strand=Plus/Minus
Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947
||| | || |||||| || | || || |||||||| | || | ||||||||||| ||
Sbjct 699534 TGGTACGCCATTCTCGAGGCCCAGACGGAGACTGGAAACCCCTTTATGCTTTACAAGGAT 699475
Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007
|||| |||| |||||| ||||||||||| | ||| ||| ||||| || || ||
Sbjct 699474 TCCTGCAACCGAAAGAGCAATCAAAAGAACCTTGGTACTATCCGTAGTTCAAACCTTTGC 699415
Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067
|| |||||| | |||| || | | ||||||| || || |||||| | || || ||
Sbjct 699414 ACTGAAATCGTTGAATACACCGCCCCAGATGAGGTTGCAGTTTGTAACTTGGCTTCTATT 699355
Query 105068 GCTCTCCCCAAGTATGTGGATCCAG-AGACAAAGACATTTGATTATGAAAAACTCCACGA 105126
|| || || | | ||||||| | | | || || |||| || |||||||| ||
Sbjct 699354 GCCCTTCCTACCTTTGTGGATGCTGTTCGCGGTGA-ATACGATTTTGGCAAACTCCATGA 699296
Query 105127 AGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT 105186
||| || | || || |||| | |||||| | ||||| | || ||||| ||
Sbjct 699295 AGTCACTCAGGTCGTTGTCAGAAACTTGAACAGAATCATTGACGGGAACCACTACCCGGT 699236
Query 105187 TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCT 105246
||| || || | ||| | | || || || |||| | | || || ||||| ||
Sbjct 699235 TGAAGAGGCACGACGAAGCAATTTCCGTCATCGCCCCATTGCTGTGGGGGTCCAGGGCCT 699176
Query 105247 CGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAA 105306
|| |||| ||| | | ||| | | || || || |||||| ||| | ||
Sbjct 699175 TGCCGATGCTTTCCTCGCTCTTCGACTGCCCTTCGACTCTCCCGAAGCCAAGCTTTTGAA 699116
Query 105307 TGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA-GGCGAGTTCAGAGTTGGCAG 105365
| | || || |||||| | || || || || |||| || | || | ||
Sbjct 699115 CACCCAAATCTTCGAGACCCTTTACCATGCTGC-GTTGACCGCATCGTGTGAACTTGCCA 699057
Query 105366 AGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAAT 105425
|||| ||||||||||| ||| |||||||||||| | ||| || || | |||||||
Sbjct 699056 AGGTCGATGGTCCATACTCCTCCTATGAGGGTTCTCCTGTTTCTCAGGGTATTCTTCAAT 698997
Query 105426 TTGATATGTGGGAAGGTGA----GACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAA 105481
||||||| |||| || | |||| | || || |||||||| | ||| || |
Sbjct 698996 ACGATATGT-GGAACGTAACGCCGACCGACCT---CTGGGACTGGGATGGTCTTAAAGCT 698941
Query 105482 CGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCC 105541
||| || | ||| | |||||||| | || | || || |||||||| ||| |
Sbjct 698940 GAGATCTCCAAGCACGGTGTCCGTAACAGCTTACTACTTGCGCCCATGCCAACTGCCAGC 698881
Query 105542 ACCGCACA-AATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597
||| || | |||||| | || || ||||||||||| ||||| | ||||||||
Sbjct 698880 ACCAGTCAGATTCTTGGCT-TCAACGAGTGCTTTGAACCTTACACCTCCAACATCTA 698825
Score = 143 bits (158), Expect = 3e-29
Identities = 409/626 (65%), Gaps = 11/626 (2%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|||||| | ||| | ||||| || ||| ||||||| || || || ||| |||| ||
Sbjct 700264 CCACAGCATATGATAATGCGAGTTGCCGTCGGTATCCACGGTGAGGACGTTGAGAAAGTA 700205
Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTT 104340
| || |||||| | |||||||| | || |||| || || | || || |||||
Sbjct 700204 ATTGAAACATACAATCTCATGTCCCA-GAAATACTTCACCCATGCCTCTCCCACTCTCTT 700146
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
|||||| || || || || |||||| | |||||||| || | || ||||||||
Sbjct 700145 CAATGCCGGAACCCCGCAGCCGCAAATGGCTTCCTGCTTCCTCATTGACATGAAGGAGGA 700086
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| ||| | |||||||| | || || | | ||||| || |||||| |||||
Sbjct 700085 CAGTATCGAAGGTATCTACGACACACTGAAGACCTGTGCTTTGATTTCAAAGACTGCTGG 700026
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
|| || || | || |||| | | | |||| ||| ||| || || ||
Sbjct 700025 AGGAATCGGTCTTAACGTCCACCGTATCCGTGCCACCGGATCCTACATTGCTGGAACCAA 699966
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
|| || | || || | || |||||||| || || ||| ||| || | |||||
Sbjct 699965 CGGCTCCTCCAACGGAATCGTCCCCATGCTTCGTGTGTTCAACAACACTGCCAGATATGT 699906
Query 104581 AAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634
| || | ||| ||||| | || | | || |||| || |||||||||||
Sbjct 699905 CGACCAGGGTGGCAACAAGCGTCCA---GGTGCCTTTGCTATCTACCTGGAGCCATGGCA 699849
Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694
||| |||||| | ||||||||||| | || ||||| || | || || | ||
Sbjct 699848 CGCTGATATCTTTGAGTTCCTTGACCTCCGCAAGAACCATGGAAAGGAAGAAGTCCGTGC 699789
Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754
||| ||||| |||| || | |||| ||| ||| | ||||||||| ||||||| |||
Sbjct 699788 CCGTGATCTATTCTTGGCCTTGTGGACTCCTGATTTGTTCATGAAGCGAGTTGAAAAGAA 699729
Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814
|||| ||||| | || || || || | |||| ||||| | | |||| | || ||
Sbjct 699728 TGGCGATTGGACCCTATTCTGCCCTAATGAGGCTCCTGGATTGGCTGATGTCTACGGAGA 699669
Query 104815 GGAGTTTGAAGCCCTTTACACAAAGT 104840
||||| || || | ||| |||||
Sbjct 699668 AGAGTTCGAGGCATTGTACGAAAAGT 699643
>seq144
Length=62475
Score = 104 bits (114), Expect = 3e-17
Identities = 160/226 (71%), Gaps = 8/226 (4%)
Strand=Plus/Minus
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTC-GC 94792
|||||| || || | ||||| || |||||||| || | | | ||| ||| | |
Sbjct 14639 AGTTCCATGCATCCGCAAGAAGGCCGATTGGGCCAT----TCGATGGATCCAAGATAAGA 14584
Query 94793 GTTCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849
|||| || || |||| || | || ||||| || |||||||| |||||| |
Sbjct 14583 ATTCCACATTCGCACAGCGCCTTGTTGCCTTTGCTGCCGTCGAGGGTATTTTCTTCAGCG 14524
Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909
| |||||| | | || | ||||| |||||||| ||||||||||| || ||| |||||
Sbjct 14523 GCTCCTTCGCCTCCATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCCGGACTCACCTTCT 14464
Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||||||| || ||||| |||||||| || || ||| || |||||
Sbjct 14463 CCAACGAACTCATCTCCCGTGACGAAGGCCTACACACTGATTTTGC 14418
>seq1
Length=4062027
Score = 95.1 bits (104), Expect = 1e-14
Identities = 218/324 (67%), Gaps = 17/324 (5%)
Strand=Plus/Plus
Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673
|| |||||||| || || | | ||| || | ||| ||| |||||||||||| |
Sbjct 2714327 AATCCATCCATTTCAGTGAGTATTTGATTGAGAGTGCTTTCACGTTCATCATTCCC---- 2714382
Query 9674 ATACCACCA-----GCACTGCG---TTG-CTTTCCCACGGCATCAATCTCATCAATGAAG 9724
||||||| | | | || ||| |||||| | ||||||||| || |||||||||
Sbjct 2714383 --ACCACCAAAGTTGGATTTCGATCTTGACTTTCCGATGGCATCAATTTCGTCAATGAAG 2714440
Query 9725 ACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCC 9784
| ||| ||||| |||| ||||| | |||| || || || ||||| | |||
Sbjct 2714441 ATGATACATGGGGTGTTTTTTCGAGCAATAGCAAATAGGTCGCGAACACGGGAAGGGCCA 2714500
Query 9785 ACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACATTGGATGAAGGGGACATTAGA 9843
|| ||||| ||||||||||| || | | | || || || | |||||| ||| ||
Sbjct 2714501 ACGCCAACGAACATCTCCACGAATTCAGAGCCGCTGACGCTGTA-GAAGGGAACAGCGGA 2714559
Query 9844 TTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAG 9903
|| || ||| | || || || ||||| ||||| ||||||||| || | || |
Sbjct 2714560 CTCGCCGGCAGTCGCCTTTGCTAGTAGAGTTTTACCGGTACCTGGCGGCCCAGAAAGAAT 2714619
Query 9904 GGCACCTCGTGGAATCTTGGCGCC 9927
|| ||||| || || || || ||
Sbjct 2714620 AGCTCCTCGAGGTATTTTCGCACC 2714643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583258897111640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |