Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq210 134 3e-26
seq241 84.2 5e-11
>seq210
Length=1335347
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||||||||||||||| ||||| ||||||| ||||| || | | || | || ||
Sbjct 1131357 AGGACAAGGTGGAGAGTTGATTCCTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCC 1131298
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || || || ||||| || ||||| ||||| || || || || ||||||||
Sbjct 1131297 TCGAGCTGTTTTCCTGCAAAGATGAGACGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCC 1131238
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||||||||| || ||| || || | ||||| |||
Sbjct 1131237 TGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGATTCGACCTCAAGAGTGATGGTC 1131178
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| |||| ||||||
Sbjct 1131177 TTGCCGGTCAGAGTTTT 1131161
Score = 114 bits (126), Expect = 3e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 225523 TCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAG 225582
|| || |||| || ||||||| || || | || || || ||||| || ||||| |||
Sbjct 1131564 TCCTTCTGGATGTTATAATCGGACAGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAG 1131505
Query 225583 ATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT 225642
|| || || || ||||| |||||||||||||||||||| ||||||||| ||| ||
Sbjct 1131504 ATGAGACGCTGCTGGTCTGGCGGAATACCTTCCTTGTCCTGGATCTTTGTCTTGACGTTG 1131445
Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATG 225702
|| || ||||| || ||| || || | ||||| || |||||||||| || || | |
Sbjct 1131444 TCTATCGTGTCGCTGGATTCTACTTCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACG 1131385
Query 225703 AACACTTGCAT 225713
|| | |||||
Sbjct 1131384 AAGATCTGCAT 1131374
>seq241
Length=1026449
Score = 84.2 bits (92), Expect = 5e-11
Identities = 102/139 (73%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 193633 ACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGACCGGGAGCTTCCT 193692
|||||||||||| | |||| || |||| |||||||| || | | || ||||| || |
Sbjct 699643 ACTTTTCGTACAATGCCTCGAACTCTTCTCCGTAGACATCAGCCAATCCAGGAGCCTCAT 699702
Query 193693 TTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCATGAAGAGGTCAGATG 193752
| ||||| || || ||||||| |||| |||| || | ||||||||| | |||| |
Sbjct 699703 TAGGGCAGAATAGGGTCCAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAG 699762
Query 193753 TCCAAATGGCGTAGAAAAG 193771
|||| | ||| |||| ||
Sbjct 699763 TCCACAAGGCCAAGAATAG 699781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192527212101134
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |