Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq241 264 2e-65
>seq241
Length=1026449
Score = 264 bits (292), Expect = 2e-65
Identities = 601/896 (67%), Gaps = 6/896 (1%)
Strand=Plus/Plus
Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984
|| || || ||||| | |||||| |||||||||| ||||| ||||| | | | |
Sbjct 699660 TCGAACTCTTCTCCGTAGACATCAGCCAATCCAGGAGCCTCATTAGGGCAGAATAGGGTC 699719
Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044
|| || |||| | | |||||| ||||| || | |||||| |||| | || | |||
Sbjct 699720 CAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAGTCCACAAGGCCAAGAAT 699779
Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104
||||| |||| | |||||| ||||| ||||| || || || ||||| |
Sbjct 699780 AGATCACGGGCACGGACTTCTTCCTTTCCATGGTTCTTGCGGAGGTCAAGGAACTCAAAG 699839
Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164
||||||| |||||||| || || || || || | | || || || || || || |||
Sbjct 699840 ATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCTGGACGCTTGTTGCCACCC 699899
Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224
|| || | ||||||||| ||||| || | || | | ||| || | || ||||| ||
Sbjct 699900 TGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGGACGATTCCGTTGGAG 699959
Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284
| || || ||||||| ||| || ||| | || || ||| | | | ||
Sbjct 699960 GAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGATACGGTGGACGTTAAGACCG 700019
Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344
|||||||| || |||| || || | ||| || |||| ||| ||||||||||| ||
Sbjct 700020 ATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCTTCAGTGTGTCGTAGATACCTTCG 700079
Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404
|||||||| ||| |||||| || || || ||| || |||||| | || |||||
Sbjct 700080 ATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGGCTGCGGGGTTCCG 700139
Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTT 78464
||||| || | || ||||| ||||| || || |||| | || | ||||||||||||
Sbjct 700140 GCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTCTGGGACATGAGATTGTATGTT 700199
Query 78465 TCAATAGCTGATTCTATGTCC-CATTGATGAATTCCTACCGCTACACGCATCAACATATG 78523
||||| || || | |||| || | || || || || || || ||||| | ||||||
Sbjct 700200 TCAATTACTTTCTCAACGTCCTCACCG-TGGATACCGACGGCAACTCGCATTATCATATG 700258
Query 78524 CTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTT 78583
||| || | |||| | ||| || || | || |||||| |||| | || ||
Sbjct 700259 CTGTGGCCGTTCAGCAACCTTGCCGTTGGTTCGTAGCAGGTATGACCTTTCAAGCGTCTT 700318
Query 78584 AAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATC 78643
|| || ||||| | ||| |||||| | ||||| | |||| | || || |||| ||
Sbjct 700319 GAAGCCGAAATACTGGTAGTTAAAGTCACGGTCGTACACAATAGCCGAGTTGAGTTCTTC 700378
Query 78644 TTTGTATTTGGTAACAATATCCATGACAGTAGT-TGAAATAATAGGAGATCGTACACCAT 78702
| ||| | || || ||| || | | || || || |||| | | || |
Sbjct 700379 AGCATGTTTCATGACGATCTCC-CGAGTCTTCTCGGATATCATGGGAGCTGGCCGGCCGT 700437
Query 78703 TTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTA-AATAGtttttttGTT 78761
| ||||| ||||| |||| | | | || || || || || | ||| | || || |||
Sbjct 700438 TCTTAGGGTTAACGTAGTGATAGAGGTCATCTATAAC-GGACGAGAATTGCTTCTTGGTT 700496
Query 78762 TCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817
| ||||| || || || || |||||||||||||| ||||| ||||| || |||||
Sbjct 700497 TGTTTGTGGAGGTTCGACACTGCTATTCTTGCAGCAAGAATGGCATAGTCTGGATG 700552
Score = 84.2 bits (92), Expect = 3e-11
Identities = 183/271 (68%), Gaps = 5/271 (2%)
Strand=Plus/Plus
Query 76781 TGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAG 76840
||| || || ||||||| ||| || | | ||||| ||||||||||| || || || ||
Sbjct 698446 TGTGAATTGGATTGGAGCAGACGCAGCCATGGTACGGAGATAGTACATGCCGGTCTTGAG 698505
Query 76841 ACCCAGACTCCATCCGTAGAAATGCATGCTTGTCA-GTTTGGAATAACTAGGATCGGCTA 76899
||| || |||| || ||| ||||| || || | ||| || |||| || |
Sbjct 698506 ACCGAGCTTCCAGCCAGCGAAGTGCATACTGGTGATCTTTCCCAT-GGTAGGCTCTTTCA 698564
Query 76900 TATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTA 76959
|| || || | || ||| || || ||||| || |||| |||||| ||||| | |
Sbjct 698565 AGTGGATGTTGAGGGATTGAGACTGGTCAATGAAGGCGCCTCGATCAGCGGCCATCTGAA 698624
Query 76960 TAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019
||| || ||||| ||||||||| | || ||| | | ||||| || |||| |
Sbjct 698625 CAATAGTACGTTGAGAAATTTCCCACACGGTCTTGTACAGAGCCTTGATGTCTGCTGGGA 698684
Query 77020 GGTTTG---TATTTTGAATGGAACCACCATC 77047
||| | | ||||| ||||||||||| ||
Sbjct 698685 TGTTAGAGATGTTTTGGATGGAACCACCGTC 698715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694666533643040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |