Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq241 293 3e-74
>seq241
Length=1026449
Score = 293 bits (324), Expect = 3e-74
Identities = 605/895 (68%), Gaps = 4/895 (0%)
Strand=Plus/Plus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
|| || || ||||| | |||||| |||| |||||| ||||| || || | | | |
Sbjct 699660 TCGAACTCTTCTCCGTAGACATCAGCCAATCCAGGAGCCTCATTAGGGCAGAATAGGGTC 699719
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
|| || |||| | | ||| || ||||| || | |||||| |||| | || | |||
Sbjct 699720 CAATCGCCATTCTTTTCAACTCGCTTCATGAACAAATCAGGAGTCCACAAGGCCAAGAAT 699779
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699
||||| |||| | |||||| ||||| ||||| || || |||||||| |
Sbjct 699780 AGATCACGGGCACGGACTTCTTCCTTTCCATGGTTCTTGCGGAGGTCAAGGAACTCAAAG 699839
Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759
||||||| |||||||| || || || || || | |||| || || || || || |||
Sbjct 699840 ATATCAGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCTGGACGCTTGTTGCCACCC 699899
Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819
|| || | ||||||||||||||| || | || | | ||| || | || ||||| ||
Sbjct 699900 TGGTCGACATATCTGGCAGTGTTGTTGAACACACGAAGCATGGGGACGATTCCGTTGGAG 699959
Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879
| || || ||||||| ||| || ||| ||||| ||| | || ||
Sbjct 699960 GAGCCGTTGGTTCCAGCAATGTAGGATCCGGTGGCACGGATACGGTGGACGTTAAGACCG 700019
Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939
|||||||| || | || || || | ||||||| |||| |||||| ||||| || ||
Sbjct 700020 ATTCCTCCAGCAGTCTTTGAAATCAAAGCACAGGTCTTCAGTGTGTCGTAGATACCTTCG 700079
Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999
||||| || ||| |||||| || || || ||| || |||||| | || |||||
Sbjct 700080 ATACTGTCCTCCTTCATGTCAATGAGGAAGCAGGAAGCCATTTGCGGCTGCGGGGTTCCG 700139
Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059
||||| || | || ||||| ||||| ||||| |||| | || | ||||||||||||
Sbjct 700140 GCATTGAAGAGAGTGGGAGAGGCATGGGTGAAGTATTTCTGGGACATGAGATTGTATGTT 700199
Query 77060 TCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCAACATATG 77118
||||| ||| || | ||| || | || || || || || || ||||| | ||||||
Sbjct 700200 TCAATTACTTTCTCAACGTCCTCACCG-TGGATACCGACGGCAACTCGCATTATCATATG 700258
Query 77119 CTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTT 77178
||| || ||||| || ||| || || | || |||||| |||| | || ||
Sbjct 700259 CTGTGGCCGTTCAGCAACCTTGCCGTTGGTTCGTAGCAGGTATGACCTTTCAAGCGTCTT 700318
Query 77179 AAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTC 77238
|| || ||||| | ||| |||||| | ||||| | |||| |||| || |||| ||
Sbjct 700319 GAAGCCGAAATACTGGTAGTTAAAGTCACGGTCGTACACAATAGCCGAGTTGAGTTCTTC 700378
Query 77239 CTTATATTTGGTAACAATATCCATGACAGTGGT-AGAAATAATTGGAGATCGTATTCCAT 77297
|| ||| | || || ||| || | | || || || |||| | | || |
Sbjct 700379 AGCATGTTTCATGACGATCTCC-CGAGTCTTCTCGGATATCATGGGAGCTGGCCGGCCGT 700437
Query 77298 TTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTT 77357
| ||||| ||||| |||| | | | ||| || || ||| ||| | || || ||||
Sbjct 700438 TCTTAGGGTTAACGTAGTGATAGAGGTCATCTATAACGGACGAGAATTGCTTCTTGGTTT 700497
Query 77358 CCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412
||||| || ||||| || |||||||| ||||| ||||| |||||||| |||||
Sbjct 700498 GTTTGTGGAGGTTCGACACTGCTATTCTTGCAGCAAGAATGGCATAGTCTGGATG 700552
Score = 84.2 bits (92), Expect = 3e-11
Identities = 184/275 (67%), Gaps = 12/275 (4%)
Strand=Plus/Plus
Query 76181 TCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAA 76240
|| || ||| | || | ||||||||||| || | | || || | |||||| ||||
Sbjct 699254 TCAATGATTCTGTTCAAGTTTCTGACAACGACCTGAGTGACTTCATGGAGTTTGCCAAAA 699313
Query 76241 TCAAATTTTC------CATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAA 76294
|| ||| | || | |||||| || ||| || ||||| || | ||||||
Sbjct 699314 TCGTATTCACCGCGAACAGCATCCACAAAGGTAGGAAGGGCAATAGAAGCCAAGTTACAA 699373
Query 76295 ACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATT---ACTACAC 76351
|| || ||||||| | || |||| | || || ||||| || || |||||
Sbjct 699374 ACTGCAACCTCATCTGGGGCGGTGTATTCAACGATTTCAGTGCAAAGGTTTGAACTAC-- 699431
Query 76352 TTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACA 76411
|||||| ||||| || | ||| ||||||||| ||| || || ||||| ||||| | |
Sbjct 699432 -GGATAGTACCAAGGTTCTTTTGATTGCTCTTTCGGTTGCAGGAATCCTTGTAAAGCATA 699490
Query 76412 AACGGAGTTCCAGTTTCAATCTGTGATTCGATAAT 76446
|| || ||||||| || |||| | |||| |||
Sbjct 699491 AAGGGGTTTCCAGTCTCCGTCTGGGCCTCGAGAAT 699525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712932074051520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |