Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq210 111 4e-19
>seq210
Length=1335347
Score = 111 bits (122), Expect = 4e-19
Identities = 142/194 (73%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972
||| || |||||||| ||||||| | || | || || || || ||| || || ||
Sbjct 1131565 CTCCTTCTGGATGTTATAATCGGACAGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAA 1131506
Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032
||| || | ||||||||| | || || |||||||| || || || ||| ||||| |
Sbjct 1131505 GATGAGACGCTGCTGGTCTGGCGGAATACCTTCCTTGTCCTGGATCTTTGTCTTGACGTT 1131446
Query 152033 CTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTC 152090
|||| |||| || | ||| ||||| ||||| |||||||||||||| || |||||
Sbjct 1131445 GTCTATCGTGTCGCTGGATTCT--ACTTCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTG 1131388
Query 152091 ACGAAGACCTGCAT 152104
||||||| ||||||
Sbjct 1131387 ACGAAGATCTGCAT 1131374
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/204 (70%), Gaps = 4/204 (2%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|||||||| || ||||| || || |||||||||||||| || | | || | || ||
Sbjct 1131357 AGGACAAGGTGGAGAGTTGATTCCTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCC 1131298
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || ||| || || ||||| || | |||||||| | | ||| || ||||| ||
Sbjct 1131297 TCGAGCTGTTTTCCTGCAAAGATGAGACGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCC 1131238
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATAG 152070
|| || || ||||| | || | | ||| ||| | || || |||||||| || |
Sbjct 1131237 TGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGA--TTCGACCTCAAGAGTGATGG 1131180
Query 152071 TTTTGCCCGTGAGAGTCTTCACGA 152094
| ||||| || ||||| |||||||
Sbjct 1131179 TCTTGCCGGTCAGAGTTTTCACGA 1131156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153816941551131
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |