Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq210 158 3e-33
seq144 105 1e-17
seq104 102 2e-16
>seq210
Length=1335347
Score = 158 bits (174), Expect = 3e-33
Identities = 167/220 (76%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| |||||||| ||||| || || || | || ||| ||||||||||||||||| |
Sbjct 1131372 CCTCCACGCAGACGAAGGACAAGGTGGAGAGTTGATTCCTTTTGGATGTTGTAGTCCGAG 1131313
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||| ||||| || ||||| || |||||||| | |||||| ||||| ||
Sbjct 1131312 AGGGTCCGGCCGTCCTCGAGCTGTTTTCCTGCAAAGATGAGACGTTGCTGGTCTGGAGGG 1131253
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| | || ||| | ||||| ||||| | ||||||
Sbjct 1131252 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGATTCGACC 1131193
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATA 283092
|| |||||||| ||||| || |||| ||| || |||| ||
Sbjct 1131192 TCAAGAGTGATGGTCTTGCCGGTCAGAGTTTTCACGACTA 1131153
Score = 136 bits (150), Expect = 8e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || ||||| || || || | ||||| || || |||||||||||||| |
Sbjct 1131074 CCACCACGGAGACGAAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 1131015
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| |||||||| ||||| || ||||| || || ||||||| || || ||||| ||
Sbjct 1131014 AGGGTGCGGCCGTCCTCGAGCTGTTTTCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGG 1130955
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| | || ||| | || |||||||| | || ||
Sbjct 1130954 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCAATAGTGTCGCTGGACTCCACC 1130895
Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075
||||| ||||| ||||| || ||
Sbjct 1130894 TCGAGGGTGATAGTCTTGCCAGT 1130872
>seq144
Length=62475
Score = 105 bits (116), Expect = 1e-17
Identities = 165/236 (70%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222
||| |||| |||| ||| | | || |||||||| | ||| || | || ||
Sbjct 14362 ATCATCACTGAAGCAGTCACCATCGAGCAGGAGTTCTTGACCGATGCCCTCCCCTGTGCC 14303
Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282
||| |||||||||||||| | |||||| | || || || || ||||| || ||| | ||
Sbjct 14302 CTTCTCGGCATGAATGCTAAGCTCATGTGCCAGTACATTGAGTTCGTCGCCGATAGGCTT 14243
Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342
|||| || || || || |||| | || ||| ||| |||||||||| || |||||
Sbjct 14242 CTCGTTGCTCTTGGTAACAAGAAGTTCTACAACACCACCAACCCCTTCGACTTCATGGAC 14183
Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCA 230398
|| || ||| || || || ||||||||||| |||||||| | ||||| ||
Sbjct 14182 AATATCTCCCTCGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGAGATTACCA 14127
>seq104
Length=3444964
Score = 102 bits (112), Expect = 2e-16
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | ||| || || || |||||||||||||
Sbjct 1585623 ACCACCACGGAGACGGAGCACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGA 1585682
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||| ||||| || ||||| || || ||||||| ||| || ||||| ||
Sbjct 1585683 AAGAGTACGGCCGTCCTCAAGCTGTTTTCCTGCGAAGATCAGACGCTGCTGGTCTGGGGG 1585742
Query 282992 AATACCCTCCTTGTCT 283007
||| ||||||||||||
Sbjct 1585743 AATTCCCTCCTTGTCT 1585758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046735699638694
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |