Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq210 141 7e-29
>seq210
Length=1335347
Score = 141 bits (156), Expect = 7e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| |||| || | || ||||| || | |||||||||||| |||||||| |||||||
Sbjct 1131600 CCGCCTCGCAACCGCAGCACCAAATGCAACGTGCTCTCCTTCTGGATGTTATAATCGGAC 1131541
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| || |||| || ||||| || || |||||||| | ||||||||| |||| ||
Sbjct 1131540 AGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCTGGCGGA 1131481
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| ||||||||| ||| ||||| ||| | | |||| |||||| |||||| ||
Sbjct 1131480 ATACCTTCCTTGTCCTGGATCTTTGTCTTGACGTTGTCTATCGTGTCGCTGGATTCTACT 1131421
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||| || || || || ||||| || ||||| |||||||| ||||||
Sbjct 1131420 TCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACGAAGATCTGCATG 1131373
Score = 107 bits (118), Expect = 1e-18
Identities = 136/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||||||||||| ||||||||||| |||| ||| ||| |||| ||
Sbjct 1131056 ACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 1130997
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || || || ||||||| |||||||| |||| || | || ||||| |||
Sbjct 1130996 AGCTGTTTTCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 1130937
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || |||||| ||| |||||||| | || || |||||
Sbjct 1130936 ATCTTGGTCTTGACGTTGTCAATAGTGTCGCTGGACTCCACCTCGAGGGTGATAGTCTTG 1130877
Query 44309 CCCGTGA 44315
|| ||||
Sbjct 1130876 CCAGTGA 1130870
Score = 102 bits (112), Expect = 6e-17
Identities = 142/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || ||||||||||||||||| || | ||| || |||| ||
Sbjct 1131354 ACAAGGTGGAGAGTTGATTCCTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCG 1131295
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || || |||||||| | ||| ||||| |||| ||| | || ||||| |||
Sbjct 1131294 AGCTGTTTTCCTGCAAAGATGAGACGTTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGG 1131235
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | ||||||||| |||||| ||||| | || || |||||
Sbjct 1131234 ATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGATTCGACCTCAAGAGTGATGGTCTTG 1131175
Query 44309 CCCGTGAGGGTCTTCACGA 44327
|| || || || |||||||
Sbjct 1131174 CCGGTCAGAGTTTTCACGA 1131156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359989254893037
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |