Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq210 170 5e-37
seq123 91.5 4e-13
>seq210
Length=1335347
Score = 170 bits (188), Expect = 5e-37
Identities = 157/199 (79%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
||||||||||||| || || || || ||||| || ||||| ||| | ||||||||||
Sbjct 1131156 TCGTGAAAACTCTGACCGGCAAGACCATCACTCTTGAGGTCGAATCCAGCGACACCATCG 1131215
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| |||||||| ||||| |||||||| || || |||||||| ||||||||||| || |
Sbjct 1131216 ACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAGCAACGTCTCA 1131275
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
|||| || |||||||||||||| || || |||| || | || || ||| ||||||| |
Sbjct 1131276 TCTTTGCAGGAAAACAGCTCGAGGACGGCCGGACCCTCTCGGACTACAACATCCAAAAGG 1131335
Query 178111 AATCAACACTGCATCTTGT 178129
||||||| || || |||||
Sbjct 1131336 AATCAACTCTCCACCTTGT 1131354
Score = 132 bits (146), Expect = 1e-25
Identities = 142/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || || || || ||||| ||||| || || || ||| | |||
Sbjct 1131377 CAGATCTTCGTCAAGACACTGACGGGCAAAACTATCACTCTGGAAGTAGAATCCAGCGAC 1131436
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| |||||| |||||||| ||||| || || || ||||||||
Sbjct 1131437 ACGATAGACAACGTCAAGACAAAGATCCAGGACAAGGAAGGTATTCCGCCAGACCAGCAG 1131496
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || ||||||||||| || || || |||| || ||||||||||| ||
Sbjct 1131497 CGTCTCATCTTTGCTGGAAAACAGCTTGAGGACGGCCGGACGCTGTCCGATTATAACATC 1131556
Query 178104 CAAAAAGA 178111
|| || ||
Sbjct 1131557 CAGAAGGA 1131564
Score = 125 bits (138), Expect = 2e-23
Identities = 129/169 (76%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002
|||| || || || ||||||||||||||||| | ||||| || || ||||||||
Sbjct 1130870 TCACTGGCAAGACTATCACCCTCGAGGTGGAGTCCAGCGACACTATTGACAACGTCAAGA 1130929
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
||||| |||||||| || || ||||| || |||||||| || || |||||||| ||||
Sbjct 1130930 CCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAGCAGCGCCTGATCTTCGCAGGAA 1130989
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111
|||||||||| || || | || || |||| || ||| |||| || ||
Sbjct 1130990 AACAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGA 1131038
>seq123
Length=229
Score = 91.5 bits (100), Expect = 4e-13
Identities = 103/136 (76%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || || || || ||||| || || || |||||||| ||||| || || |||
Sbjct 96 CAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGA--GCCCAGCG 153
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| ||||| |||||||| ||||| || || || |||||||
Sbjct 154 ACACCATTGAGAACGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAGC 213
Query 178042 AACGACTTATCTTCGC 178057
| | || ||||| ||
Sbjct 214 AGAGGCTGATCTTTGC 229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203727174647634
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |