Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichophyton_20violaceum_20[genbank_20GCA_5F001651435.1_202016-05-
19] 261 sequences; 23,367,123 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq210 150 2e-31
seq104 105 6e-18
>seq210
Length=1335347
Score = 150 bits (166), Expect = 2e-31
Identities = 158/205 (77%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | || || || || |||||||||||||| ||||| ||||||||
Sbjct 1131075 GCCACCACGGAGACGAAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 1131016
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||||||||| |||| |||||||| || || ||||| ||||||||||| ||||| | |||
Sbjct 1131015 GAGGGTGCGGCCGTCCTCGAGCTGTTTTCCTGCGAAGATCAGGCGCTGCTGGTCTGGGGG 1130956
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || |||||||||| ||| || ||| ||| | | | ||||||||| |||||||
Sbjct 1130955 GATGCCCTCCTTGTCCTGGATCTTGGTCTT-GACGTTGTCAATAGTGTCGCTGGACTCCA 1130897
Query 41814 CCTCCACCGTTATCGTTTTACCCGT 41838
|||| | || || || || || ||
Sbjct 1130896 CCTCGAGGGTGATAGTCTTGCCAGT 1130872
Score = 149 bits (164), Expect = 6e-31
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || | || | ||||| ||||| ||||||||||||||| |||||||| |||||
Sbjct 1131600 CCGCCTCGCAACCGCAGCACCAAATGCAACGTGCTCTCCTTCTGGATGTTATAATCGGAC 1131541
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| || ||||| || || || || || || ||||| ||||| | |||
Sbjct 1131540 AGCGTCCGGCCGTCCTCAAGCTGTTTTCCAGCAAAGATGAGACGCTGCTGGTCTGGCGGA 1131481
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||||||||| ||| ||| ||| ||| | | | |||||||| || || ||
Sbjct 1131480 ATACCTTCCTTGTCCTGGATCTTTGTCTT-GACGTTGTCTATCGTGTCGCTGGATTCTAC 1131422
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| || || ||||| |||||||| ||||| ||||| |||||||||
Sbjct 1131421 TTCCAGAGTGATAGTTTTGCCCGTCAGTGTCTTGACGAAGATCTGCATG 1131373
>seq104
Length=3444964
Score = 105 bits (116), Expect = 6e-18
Identities = 108/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || ||||| | ||| || || || ||| ||||||||||||||| |||||
Sbjct 1585620 ACCACCACCACGGAGACGGAGCACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTC 1585679
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
|| || || || |||| || ||||| || || ||||| ||||| ||||| ||||| |
Sbjct 1585680 AGAAAGAGTACGGCCGTCCTCAAGCTGTTTTCCTGCGAAGATCAGACGCTGCTGGTCTGG 1585739
Query 41752 GGGAACGCTCTCCTTGTCCAT 41772
||||| | ||||||||| ||
Sbjct 1585740 GGGAATTCCCTCCTTGTCTAT 1585760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462302491733200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |