Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq340 120 6e-22 >seq340 Length=732193 Score = 120 bits (132), Expect = 6e-22 Identities = 260/380 (68%), Gaps = 12/380 (3%) Strand=Plus/Minus Query 230264 TGATGCCTGGCCTCGGTCTGTCT--AACGAGTTCATCAGTCGCGACGAGGGTCTCCATCA 230321 ||||||||||| | ||| ||| |||||| ||||| ||||||||||| ||||| Sbjct 107734 TGATGCCTGGCTT--GTCATTCTCAAACGAGCTCATCTCCCGCGACGAGGGCCTCCACAC 107677 Query 230322 ACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCAT-TCGAGACG--GT 230378 | |||| | || ||| |||| | | |||||| | || | || | | | || Sbjct 107676 TGACTTCGCCTGTCTGTTGT--TCAAC-CACTTGAACAACCGCCCTTCTCAACAGGCTGT 107620 Query 230379 CAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCC 230438 || | |||||| || || |||| | || | || ||| | ||| ||| |||| Sbjct 107619 TCAAGATATCATTGTCGAGGCTGTTGGCATTGAGCAAGAATTCTTGACTGAAGCTCTTCC 107560 Query 230439 ATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGA 230498 ||| ||| | ||||||||| || | || ||| ||||| || ||||| || ||||| Sbjct 107559 TTGTGCTCTTTTGGGCATGAACTCTAAGCTCATGAAGCAGTATATTGAATTTGTTGCCGA 107500 Query 230499 CCGCATTTTTGTTG-CACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCAT 230557 ||| || | |||| | || ||| || || | ||||| | | ||||| || | | Sbjct 107499 CCGTCTTCT-GTTGTCTCTCGGTAACCCAAAGTTTTACAATGCCACTAACCCATTCGACT 107441 Query 230558 TTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACT 230617 |||||||| ||||| ||| || || |||||||||||||| ||||||||| | |||| Sbjct 107440 TTATGGAGTCTATTTCTCTTGCCGGCAAAACCAACTTCTTCGAGAAGCGTGTCGGAGACT 107381 Query 230618 ATCAGAGGCCTGGTGTGATG 230637 |||||| ||||||| ||| Sbjct 107380 ATCAGAAAGCTGGTGTCATG 107361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057818605758740