Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq340 100 3e-16 >seq340 Length=732193 Score = 100 bits (110), Expect = 3e-16 Identities = 246/364 (68%), Gaps = 12/364 (3%) Strand=Plus/Plus Query 16688 ACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAA 16747 || || || ||||| ||||| |||||||| | ||||| ||| |||||| || || || Sbjct 107389 ACACGCTTCTCGAAGAAGTTGGTTTTGCCGGCAAGAGAAATAGACTCCATAAAGTCGAAT 107448 Query 16748 GGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTA 16805 || ||||| || || ||| ||| | || || || | | | || || | Sbjct 107449 GGGTTAGTGGCATTGTAAAACTTT--GGGTTACCGAGAGACAACAGAAGACGGTCGGCAA 107506 Query 16806 CAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACC-GGAAGA 16864 ||||||| ||||| || ||| | | ||||||| || | |||| | || |||||| Sbjct 107507 CAAATTCAATATACTGCTTCATGAGCTTAGAGTTCATGCCCAAAAGA-GCACAAGGAAGA 107565 Query 16865 GCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA-CT--AGCAACT 16921 ||||| ||||| ||| |||||| || |||| || || ||| ||| || | || | Sbjct 107566 GCTTCAGTCAAGAATTCTTGCTCAATGCCAACAGCCTCGACAATGATATCTTGAACAGCC 107625 Query 16922 CGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGT 16981 ||| | | || | |||| ||| || || |||| |||||| ||||| || || Sbjct 107626 TGTT--GAGAAGGGCGGTTGTTCAAG-TGGTTGAACAACAGACAGGCGAAGTCAGTGTGG 107682 Query 16982 AATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGT 17041 | |||||||| | | ||| || ||||| || |||| ||| || |||||| ||| ||| Sbjct 107683 AGGCCCTCGTCGCGGGAGATGAGCTCGTTTGAGAATGACAAGCCAGGCATCAATCCACGT 107742 Query 17042 TTCT 17045 |||| Sbjct 107743 TTCT 107746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543025210640