Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq320 116 4e-21 >seq320 Length=806987 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || || || | || ||||| || |||||| |||| ||||| || | Sbjct 610171 AATGCAAATCTTTGTCAAGACCTTAACCGGCAAGACAATCACCCTCGAGGTCGAGTCCTC 610112 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | |||| ||||| ||||| | || || ||||| || || | |||| Sbjct 610111 GGACACCATTGACAACG-TCAAGTCGAAAATCCAAGATAAGGAGGGTATTCCTCCAGACC 610053 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||||||| | |||| ||| || || ||||| || || | || |||||| || |||| Sbjct 610052 AGCAACGATTGATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTCTCTGATTACA 609993 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||| ||||||||| | || || ||||| || Sbjct 609992 ACATTCAGAAGGAGTCTACCCTTCATCTCGT 609962 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| || |||||||| ||| | || || ||| | | |||| | | |||| ||||| Sbjct 610659 TCACTGGAAAAACCATTACCCTTGAGGTGGAATCGTCGGACACTATCGACAACG-TCAAG 610601 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || |||| ||||| ||||| || || | || |||||||| | |||| || || Sbjct 610600 TCTAAGATTCAGGACAAGGAGGGAATTCCTCCAGATCAGCAACGTTTGATCTTTGCTGGA 610541 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || ||||| || |||| ||||||||| || ||||||||||| |||||| | || || Sbjct 610540 AAGCAGCTTGAGGACGGACGCACCCTCTCAGATTACAACATCCAAAAGGAGTCTACCCTT 610481 Query 40891 CATCTAGT 40898 ||||| || Sbjct 610480 CATCTTGT 610473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515216636784480