Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq383 86.0 9e-12 >seq383 Length=466833 Score = 86.0 bits (94), Expect = 9e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || || || || |||||||| ||| | ||| | || | Sbjct 193493 ATGCAGATTTTTGTCAAAACCCTTACCGGTAAAACTATTACTCTCGAGGTCGAGTCTTCG 193552 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || || | || || ||||| ||||| ||||| || || || || ||| Sbjct 193553 GATACGATCGACAACGTGAAGGGTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAA 193612 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | ||||| || || || || || ||||||| |||| || || ||||||||| Sbjct 193613 CAGCGCCTTATCTTCGCCGGTAAGCAGCTAGAGGACGGTCGTACCTTGAGTGATTATAAT 193672 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || || || | || | || | ||| | ||||||||||| Sbjct 193673 ATCCAAAAGGAGTCGACCCTCCACCTTGTCCTTCGTCTGCGAGGTGGTAT 193722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755452241606400