Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq320 122 8e-23 seq383 111 1e-19 seq98 84.2 2e-11 >seq320 Length=806987 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || |||||||||||||| | || || |||||| ||||| |||||| Sbjct 609974 GTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTACGGCCATCCTCAAGCTGCTTTCCA 610033 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | || ||||| || ||||| || |||||||| ||| ||||| || Sbjct 610034 GCGAAGATCAATCGTTGCTGGTCTGGAGGAATACCCTCCTTATCTTGGATTTTCGACTTG 610093 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | |||||||| | ||||||||||| ||| | || |||||||| | || Sbjct 610094 ACGTTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATTGTCTTGCCGGTTAAGGTC 610153 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| || ||||| Sbjct 610154 TTGACAAAGATTTGCAT 610170 Score = 95.1 bits (104), Expect = 1e-14 Identities = 127/175 (73%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCTCGAGCTGTTTTC 118599 |||||||| ||||| |||||||||| || | || | |||| ||||| ||||| |||| Sbjct 610485 GTAGACTCCTTTTGGATGTTGTAAT--CTGAGAGGGTGCGTCCGTCCTCAAGCTGCTTTC 610542 Query 118600 CAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTT 118659 |||| |||| | ||| |||||||| ||||| || ||||||||||| ||| || | Sbjct 610543 CAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCCCTCCTTGTCCTGAATCTTAGACT 610602 Query 118660 TAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 | || | |||| ||||||| || ||||| | ||| | ||||| || || Sbjct 610603 TGACGTTGTCGATAGTGTCCGACGATTCCACCTCAAGGGTAATGGTTTTTCCAGT 610657 >seq383 Length=466833 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| ||||| || || ||||| |||| || || ||||| ||||| Sbjct 193696 GTGGAGGGTCGACTCCTTTTGGATATTATAATCACTCAAGGTACGACCGTCCTCTAGCTG 193637 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| || ||||| || || || || ||||| ||||| || ||| || Sbjct 193636 CTTACCGGCGAAGATAAGGCGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGAATCTT 193577 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| || |||| ||||||||||| || | ||||| ||||| Sbjct 193576 ACCCTTCACGTTGTCGATCGTATCCGAAGACTCGACCTCGAGAGTAATAGTTTTACCGGT 193517 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| |||||||||||||| Sbjct 193516 AAGGGTTTTGACAAAAATCTGCAT 193493 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| ||||| || || || ||||||| ||| || |||||| Sbjct 193929 ACCAAGTGTAGAGTTGACTCCTTTTGGATATTATAGTCGCTCAAAGTACGTCCATCCTCC 193870 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||| || ||||| |||| ||||| || ||||| || || || |||||||| || Sbjct 193869 AACTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGGGGGATACCCTCCTTATCCTGG 193810 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| || || | || | || || | ||||| || | || | ||||| Sbjct 193809 ATTTTACCCTTGACGTTGTCAATAGTATCGGAAGATTCGACTTCCAAAGTAATGGTTTTT 193750 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| |||||||||||||| Sbjct 193749 CCAGTAAGGGTTTTGACAAAAATCTGCAT 193721 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||||||||||| ||||||||||| ||| | || | ||| || | || Sbjct 193468 GTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCCAATTG 193409 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || || | || ||||| |||||||| ||||| ||||||||||||||| |||||| Sbjct 193408 CTTGCCGGCAAATATCAGACGTTGCTGATCTGGAGGAATGCCCTCCTTGTCTTGAATTTT 193349 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 ||| || | |||| ||||||| |||||| || | || | || || ||||| Sbjct 193348 GCCTTTGACATTATCGATTGTGTCCGAAGACTCGACTTCAAGAGTGATTGTCTTTCCGGT 193289 Query 118715 CA 118716 || Sbjct 193288 CA 193287 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||||||||| || || || || ||| | ||||||| ||| ||||||||||| || Sbjct 193169 GTAGACTCTTTCTGGATATTATAGTCGGAGAGAGTGCGCCCATCTTCGAGCTGTTTACCG 193110 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || | ||||||||| || ||||| || || || |||||| || || || Sbjct 193109 GCGAAAATCAAACGCTGCTGGTCTGGAGGAATCCCTTCTTTGTCTTGGATCTTGCTCTTC 193050 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || | |||| |||||||| | ||| ||||| | || | || || ||||| Sbjct 193049 ACATTGTCGATGGTGTCCGAGGACTCAACCTCCAAAGTGATGGTCTTTCCGGT 192997 >seq98 Length=1126903 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642 ||| ||||| || || ||||| | || | | ||||||||| ||||| || |||||||| Sbjct 1023257 ATCTTCGAGTTGCTTCCCAGCAAATATCAACCTCTGCTGATCCGGAGGGATCCCCTCCTT 1023316 Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702 ||| ||||| || || | || | || || | |||||| ||||| | ||| | Sbjct 1023317 ATCTTGGATTTTGCTCTTGACATTGTCAATTGTATCTGAGCTCTCTACCTCCAAGGTGAT 1023376 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||||| ||| || || ||||||||||| Sbjct 1023377 GGTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCAT 1023412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828295651416