Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq320 98.7 8e-16 seq287 82.4 6e-11 >seq320 Length=806987 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||| ||||||||||| || ||| || ||| | || ||| Sbjct 609734 ACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGAGTACGACCATCCTCC 609793 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || || || || || ||||| ||||| ||||| ||||| | ||||||||| ||| | Sbjct 609794 AACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGA 609853 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | |||| | ||||||||| | ||| || ||||| Sbjct 609854 ATCTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTT 609913 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||| || || || |||||||| Sbjct 609914 CCGGTCAAAGTTTTAACGAAAATTTGCAT 609942 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||||||||| || || || | || || || || ||||| ||||| Sbjct 609979 CTCCTTCTGAATGTTGTAATCAGAGAGGGTACGGCCATCCTCAAGCTGCTTTCCAGCGAA 610038 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 ||||| || || ||||| ||||| | ||||||||| || ||||| ||| || Sbjct 610039 GATCAATCGTTGCTGGTCTGGAGGAATACCCTCCTTATCTTGGATTTTCGACTTGACGTT 610098 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||||| ||| ||||| | ||| || |||||||| || | ||||| || Sbjct 610099 GTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATTGTCTTGCCGGTTAAGGTCTTGAC 610158 Query 45325 AAAGATTTGCAT 45336 |||||||||||| Sbjct 610159 AAAGATTTGCAT 610170 >seq287 Length=845177 Score = 82.4 bits (90), Expect = 6e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || |||||||||||||| ||||||||||| || |||| |||| || || || Sbjct 368633 TGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGACCGTCCTCAAGCTGC 368692 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTT 45251 || || ||||| ||||| |||||||| || || || | || ||||| ||| | |||| Sbjct 368693 TTCCCAGCGAAGATCAAACGCTGTTGATCTGGGGGAATTCCTTCCTTATCCTCTATTT 368750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395073283638358