Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq342 118 1e-21 >seq342 Length=727325 Score = 118 bits (130), Expect = 1e-21 Identities = 311/470 (66%), Gaps = 6/470 (1%) Strand=Plus/Plus Query 38077 TCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGT 38136 ||||| || || |||||| || ||| | |||||||||||||| ||||||||||| Sbjct 61076 TCTTCCTTGCCATGATTCTTCCTCAAGTCAATGAAATCGAATATATCCGCGTGCCATGGC 61135 Query 38137 TCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACT 38196 || || || || | | || || ||||| || | |||||||| | || ||| || | Sbjct 61136 TCCATGTAGATAGCAAAGGCCCCGGGTCTCTTGTTGCCTCCCTGGTCAACATACCTGGCG 61195 Query 38197 GTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGAT 38256 || | |||| | | ||||||||| || || || || ||||| | || || | |||| Sbjct 61196 GTATGATTAAACACTCTTAACATTGGCACAATGCCGTTAGAACTACCATTGGTCCCGGCA 61255 Query 38257 ATATAAGTACCCTTAGCTCGTAT--ATTACTTATCGACAATCCTATTCCACCTGCATGTT 38314 ||||| | ||| |||| || || | | | | | | ||| || || || ||| || Sbjct 61256 ATATAGGAACCAGTAGCACGAATGCAGTGAATGTTG--AGTCCAATACCGCCAGCAGTTT 61313 Query 38315 TTGATATTAAAGCGCATTGTTTTAA-CGTATCAAATATACCTTCTATACTGTCATCCTTT 38373 |||| || | ||| || || |||| ||||| | ||||| || || ||| | || Sbjct 61314 TTGAAATCATAGCACA-GGTCTTAAGGGTATCGTAAATACCATCAATCGAGTCCCCTTTC 61372 Query 38374 ATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTA 38433 || | | | ||||| || | ||||||| |||| || || || || || | ||| Sbjct 61373 ATAGTAACCAAGAAACAGGACGAGAGTTGAGGCGATGGTGTGCCTGCATTGAAGAGAGTA 61432 Query 38434 GGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCT 38493 || || ||||| | || | ||| ||| |||||||| || || || | || Sbjct 61433 GGCGAAGCATGGGTAAAATACTTTGAAGACGTGAGGTTATATGTCTCGATAACCTTGTCG 61492 Query 38494 ATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGG 38543 | ||| | || ||||| || | || || | ||| |||||||| || || Sbjct 61493 ACATCCTCTCCATGAATTCCGACAGCCACACGCATAAGCATATGCTGAGG 61542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468522469089120