Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq342 136 5e-27 >seq342 Length=727325 Score = 136 bits (150), Expect = 5e-27 Identities = 346/516 (67%), Gaps = 8/516 (2%) Strand=Plus/Plus Query 66171 TGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 66230 ||||| || |||| ||| || || | | || || | ||||| |||||||| || | Sbjct 61127 TGCCATGGCTCCATGTAGATAGCAAAGGCCCCGGGTCTCTTGTTGCCTCCCTGGTCAACA 61186 Query 66231 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 66290 || || ||||| | |||| | ||||| |||||||| | ||| || || || |||||||| Sbjct 61187 TACCTGGCGGTATGATTAAACACTCTTAACATTGGCACAATGCCGTTAGAACTACCATTG 61246 Query 66291 GTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT-AGACCTATTCCCCC 66349 ||||||| |||||| ||| | |||||||| | | | || | || || || || || Sbjct 61247 GTCCCGGCAATATAGGAACCAGTAGCACGAAT-GCAGTGAATGTTGAGTCCAATACCGCC 61305 Query 66350 TGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTCTATACTAT 66408 || |||| || || | || || || |||| ||||| || || || || || | Sbjct 61306 AGCAGTTTTTGAAATCATAGCACA-GGTCTTAAGGGTATCGTAAATACCATCAATCGAGT 61364 Query 66409 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA-CTAGTTCCCGCATTA 66467 | | |||| ||| | |||||| || | || | | ||| || || ||||| Sbjct 61365 CCCCTTTCATAGTAACCAAGAAACAGGACGAGAGTT-GAGGCGATGGTGTGCCTGCATTG 61423 Query 66468 AATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATA 66527 || | ||||| ||||| || ||||| | ||| ||| || || || ||||| ||| Sbjct 61424 AAGAGAGTAGGCGAAGCATGGGTAAAATACTTTGAAGACGTGAGGTTATATGTCTCGATA 61483 Query 66528 GCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 66587 | ||| | |||| | ||||||||| || || |||||||| | ||| |||||||| Sbjct 61484 ACCTTGTCGACATCCTCTCCATGAATTCCGACAGCCACACGCATAAGCATATGCTGAGGA 61543 Query 66588 CTTTCAACGATCTTGTTGTTTATTTTCAACAA-GTAGGATTTTTCCAAAGTTTTAAAACC 66646 | ||| | | ||| | || | || || ||| || ||||||||||| || || Sbjct 61544 CGCTCAGC-AACTTTTCCATTGATGCGAAGAAGGTACGAACGCTCCAAAGTTTTGAAGCC 61602 Query 66647 AAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 66682 ||| || ||||| ||| || ||||| ||||| Sbjct 61603 AAAGTAATTGTAGTTAAAATCCTTATCGTAGATAAT 61638 Score = 100 bits (110), Expect = 4e-16 Identities = 360/556 (65%), Gaps = 13/556 (2%) Strand=Plus/Plus Query 65565 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTC--AGCTTCTG 65622 || ||||||||||||| ||| | ||||||||| ||| | || | |||| ||| || | Sbjct 60458 AAACCTTGAACACCAACACCAACAGGTCTATGCCTCGTGTT--ACTTTTCCTAGCCTCAG 60515 Query 65623 GAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCA 65682 | | ||||| | || | ||| || || || ||||| ||| ||| | || ||| || Sbjct 60516 GGACGGGATAGAAGTTGACATCGATGATCTTGTTGAGGTTTTTGATGACGACCTTGGTCA 60575 Query 65683 CATCCTTCAGTTTGAGAAAATC-AAATCGCTCATCT-ATTACAAACATGT----TCAATG 65736 | || | || ||| ||||| | |||| | ||| | | ||||| | ||| | Sbjct 60576 CCTCGTGCAACTTGGCGAAATCGTACTCGCCCCTCTGAACATCAACATATGTAGGCAAGG 60635 Query 65737 CAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAG 65796 | | ||||||| ||||||||| || ||||||| || | ||| | | ||||| | Sbjct 60636 CCAACGATGCCAAATTACAAACTGCGACCTCATCAGGTGCACTATACTCCACAATCTCGG 60695 Query 65797 TGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACG 65856 | || ||||| | | |||||||| || || || || || || |||||| | Sbjct 60696 TACAGAGATTGGACGATCTAATGGTTCCCAAGTTCTGCTGGTTGGATTTGCGGTTACATG 60755 Query 65857 CATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCC 65916 | ||||| || || ||||| || | ||||| ||| | || | ||| | ||| | || Sbjct 60756 CGTCCTTGTAGAGCATGAAAGGGTTGCCAGTCTCAGTTTGGGCTTCGAGAATGTGATACC 60815 Query 65917 AGACGACTCGAGCCTTTAT--TATAGATTTGTATCTCTTTTCTCTT-TCGTATAGTGTAT 65973 ||| | | || || || | | | | ||||| | || || ||| ||| Sbjct 60816 AGAGTTTTTGCGCTTTGATGGTCTTGCGAGCAAGGTCTTTAGTATTCTCATATTTGTTAT 60875 Query 65974 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACA 66033 | | ||||| || || |||||||| | | |||| || || ||||| ||||| | Sbjct 60876 AGAGAGCCTCGAATTCTTCACCCCAAACGTCGGCCAAACCTGGGGCTTCATTAGGACAAA 60935 Query 66034 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 66093 | |||||| | | ||| |||| ||||| || |||||||| |||||||||| Sbjct 60936 AGAGGCTCCACTCGGCATTTGCCTCAACTCTCTTCATGAATAGATCAGGGATCCAAAGAG 60995 Query 66094 CTATAAATAAATCTCT 66109 | || |||||||| Sbjct 60996 CGTAGAACAAATCTCT 61011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658169525590320