Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq320 120 3e-22 seq383 96.9 3e-15 >seq320 Length=806987 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| ||||||| || |||||||| ||||||||||||||| Sbjct 609716 CCGCCACGAAGACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAA 609775 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | || || | ||| ||||||||| |||||| || ||||| || ||||| Sbjct 609776 AGAGTACGACCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGA 609835 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || || || ||| | || | || | | || | |||||| | | |||||| Sbjct 609836 ATACCCTCCTTATC-CTGAATCTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCCAC 609894 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | ||||| |||||||| ||||| ||||| |||||||| Sbjct 609895 CTCGAGGGTGATAGTCTTTCCGGTCAAAGTTTTAACGAAAATTTGCAT 609942 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||| | ||| | |||| |||||||| ||||| ||||| ||||| Sbjct 610455 CCGCCACGAAGACGGAGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGAG 610514 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| || ||||| || |||||| |||||| |||||||||||| ||||| Sbjct 610515 AGGGTGCGTCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGA 610574 Query 139658 ATGCCTTCTTTGTC 139671 || || || ||||| Sbjct 610575 ATTCCCTCCTTGTC 610588 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| |||||||| || |||||||| ||||| | || | || || ||||| Sbjct 609968 TGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTACGGCCATCCTCAAGCTGC 610027 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || ||||| |||||| |||||||| || ||||| || || || || || |||||| Sbjct 610028 TTTCCAGCGAAGATCAATCGTTGCTGGTCTGGAGGAATACCCTCCTTATCTTGGATTTTC 610087 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | || | ||||| | || ||| ||||| | ||| | ||||||||||| Sbjct 610088 GACTTGACGTTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATTGTCTTGCCGGTT 610147 Query 139742 AACGTTTTTACGAATATTTGCAT 139764 || || || || || |||||||| Sbjct 610148 AAGGTCTTGACAAAGATTTGCAT 610170 >seq383 Length=466833 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||||| || | |||| ||||||||||| || || ||||| ||| Sbjct 193199 CCGCCACGCAGACGCAGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAG 193140 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| | ||||||||||||||||| || | |||| ||| ||||| || ||||| Sbjct 193139 AGAGTGCGCCCATCTTCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGA 193080 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||||||||| ||| || || | | || | ||||| | || ||| ||| Sbjct 193079 ATCCCTTCTTTGTCTTGGATCTTGCTCTTCACATTGTCGATGGTGTCCGAGGACTCAACC 193020 Query 139718 TCAACGGTCACCGTCTTGCCGGT 139740 || | || | ||||| ||||| Sbjct 193019 TCCAAAGTGATGGTCTTTCCGGT 192997 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||| | || | ||| | ||||||||||| |||||||| || ||| Sbjct 193491 CCACCTCGCAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAG 193432 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | || || || ||| | ||||||||||||||||| ||||| Sbjct 193431 AGGGTTCTGCCATCTTCCAATTGCTTGCCGGCAAATATCAGACGTTGCTGATCTGGAGGA 193372 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||||| ||| | | || | |||||| | | ||| || Sbjct 193371 ATGCCCTCCTTGTCTTGAATTTTGCCTTTGACATTATCGATTGTGTCCGAAGACTCGACT 193312 Query 139718 TCAACGGTCACCGTCTTGCCGGTCA 139742 |||| || | ||||| ||||||| Sbjct 193311 TCAAGAGTGATTGTCTTTCCGGTCA 193287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496061532081600