Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq342 143 4e-29 >seq342 Length=727325 Score = 143 bits (158), Expect = 4e-29 Identities = 351/524 (67%), Gaps = 6/524 (1%) Strand=Plus/Plus Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 ||||| | ||||| || |||| ||| || || | | || |||| ||||| |||||| Sbjct 61118 ATATCCGCGTGCCATGGCTCCATGTAGATAGCAAAGGCCCCGGGTCTCTTGTTGCCTCCC 61177 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 || || | || || ||||| | |||| | ||||| |||||||| | ||| || || || Sbjct 61178 TGGTCAACATACCTGGCGGTATGATTAAACACTCTTAACATTGGCACAATGCCGTTAGAA 61237 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 80219 ||||||||||||||| |||||| ||| | |||||||| | | | || | || || Sbjct 61238 CTACCATTGGTCCCGGCAATATAGGAACCAGTAGCACGAAT-GCAGTGAATGTTGAGTCC 61296 Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCT 80278 || || || || |||| || || | || || || |||| ||||| || || || | Sbjct 61297 AATACCGCCAGCAGTTTTTGAAATCATAGCACA-GGTCTTAAGGGTATCGTAAATACCAT 61355 Query 80279 CTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA-CTAGTT 80337 | || || | |||| ||| | |||||| || | || | | ||| || Sbjct 61356 CAATCGAGTCCCCTTTCATAGTAACCAAGAAACAGGACGAGAGTT-GAGGCGATGGTGTG 61414 Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 80397 || ||||| || | ||||| ||||| || ||||| | ||| |||| || || || Sbjct 61415 CCTGCATTGAAGAGAGTAGGCGAAGCATGGGTAAAATACTTTGAAGACGTGAGGTTATAT 61474 Query 80398 GTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATG 80457 ||||| ||| | || | |||| | ||||||||| || || |||||||| | ||| Sbjct 61475 GTCTCGATAACCTTGTCGACATCCTCTCCATGAATTCCGACAGCCACACGCATAAGCATA 61534 Query 80458 TGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTT 80517 |||||||| | ||| | | || ||| || | | ||| || ||||||||| Sbjct 61535 TGCTGAGGACGCTCAGCAACTTTTCCATTGATGCGAAGAAGGTACGAACGCTCCAAAGTT 61594 Query 80518 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 80561 || || ||||| || ||||| ||| || ||||| ||||| Sbjct 61595 TTGAAGCCAAAGTAATTGTAGTTAAAATCCTTATCGTAGATAAT 61638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718265226612720