Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq342 136 5e-27 >seq342 Length=727325 Score = 136 bits (150), Expect = 5e-27 Identities = 352/531 (66%), Gaps = 4/531 (1%) Strand=Plus/Plus Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183 ||||| | ||||| || |||| ||| || || | | || || | ||||| |||||| Sbjct 61118 ATATCCGCGTGCCATGGCTCCATGTAGATAGCAAAGGCCCCGGGTCTCTTGTTGCCTCCC 61177 Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243 || || | || || ||||| | |||| | ||||| |||||||| | ||| || || || Sbjct 61178 TGGTCAACATACCTGGCGGTATGATTAAACACTCTTAACATTGGCACAATGCCGTTAGAA 61237 Query 72244 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCT 72303 |||||||||||||| |||||| ||| | |||||||| | ||| || || Sbjct 61238 CTACCATTGGTCCCGGCAATATAGGAACCAGTAGCACGAATGCAGTGAATGTTGAGTCCA 61297 Query 72304 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTC 72362 || || || || |||| || || | || || || |||| ||||| || || || || Sbjct 61298 ATACCGCCAGCAGTTTTTGAAATCATAGCACA-GGTCTTAAGGGTATCGTAAATACCATC 61356 Query 72363 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA-CTAGTTC 72421 || || | |||| ||| | |||||| || | || | | ||| || | Sbjct 61357 AATCGAGTCCCCTTTCATAGTAACCAAGAAACAGGACGAGAGTT-GAGGCGATGGTGTGC 61415 Query 72422 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 72481 | ||||| || | ||||| ||||| || ||||| | ||| |||| || || || | Sbjct 61416 CTGCATTGAAGAGAGTAGGCGAAGCATGGGTAAAATACTTTGAAGACGTGAGGTTATATG 61475 Query 72482 TCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATAT 72541 |||| ||| | || | |||| | ||| ||||| || || |||||||| | ||||| Sbjct 61476 TCTCGATAACCTTGTCGACATCCTCTCCATGAATTCCGACAGCCACACGCATAAGCATAT 61535 Query 72542 GCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 72601 ||||||| | ||| | | || ||| || | | ||| || |||||||||| Sbjct 61536 GCTGAGGACGCTCAGCAACTTTTCCATTGATGCGAAGAAGGTACGAACGCTCCAAAGTTT 61595 Query 72602 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAAT 72652 | || ||||| || ||||| ||| || ||||| ||||| | |||| Sbjct 61596 TGAAGCCAAAGTAATTGTAGTTAAAATCCTTATCGTAGATAATGGCAGAAT 61646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671135861082480