Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq383 95.1 1e-14 seq320 84.2 2e-11 >seq383 Length=466833 Score = 95.1 bits (104), Expect = 1e-14 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 ||||| ||||| || |||||||| ||| | || || ||||| | ||| || || Sbjct 193461 GTAGACTCTTTCTGAATGTTGTAGTCGGAGAGGGTTCTGCCATCTTCCAATTGCTTGCCG 193402 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| | ||||||||||||||||| ||||| ||||| || ||||| |||||| ||| Sbjct 193401 GCAAATATCAGACGTTGCTGATCTGGAGGAATGCCCTCCTTGTCTTGAATTTTGCCTTTG 193342 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCA 143162 | | || | ||||||| | || ||||||| ||| | ||||| ||||||| Sbjct 193341 ACATTATCGATTGTGTCCGAAGACTCGACTTCAAGAGTGATTGTCTTTCCGGTCA 193287 >seq320 Length=806987 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| | ||| | ||||| ||||| || ||||| ||||||||||| Sbjct 610455 CCGCCACGAAGACGGAGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGAG 610514 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||| || || || || |||||| |||||| |||||||||||| ||||| Sbjct 610515 AGGGTGCGTCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGA 610574 Query 143078 ATGCCTTCTTTGTC 143091 || || || ||||| Sbjct 610575 ATTCCCTCCTTGTC 610588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507011877603360