Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq383 87.8 1e-12 seq320 86.0 5e-12 >seq383 Length=466833 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || || || || || || ||||| || || || ||||| | | | | | || || Sbjct 193930 AACCAAGTGTAGAGTTGACTCCTTTTGGATATTATAGTCGCTCAAAGTACGTCCATCCTC 193871 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 || || || ||||| | || | ||||||||| || || || || || || || Sbjct 193870 CAACTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGGGGGATACCCTCCTTATCCTG 193811 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||||| | ||| || | || || |||||| | ||| || || || ||||||||||| Sbjct 193810 GATTTTACCCTTGACGTTGTCAATAGTATCGGAAGATTCGACTTCCAAAGTAATGGTTTT 193751 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || ||||| |||||||| |||||| Sbjct 193750 TCCAGTAAGGGTTTTGACAAAAATCTGCATA 193720 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||||||||| || ||||| || || || || ||| ||| | | | | ||||| | || Sbjct 193176 ATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAGAGAGTGCGCCCATCTTCGAGCTG 193117 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 ||| || ||| | |||||||| || ||||| ||||| ||||||||||| || || Sbjct 193116 TTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGAATCCCTTCTTTGTCTTGGATCTT 193057 Query 15280 GCTCTTTACAATTTCTATGGTATC 15303 |||||| ||| | || ||||| || Sbjct 193056 GCTCTTCACATTGTCGATGGTGTC 193033 >seq320 Length=806987 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || ||||||||||| ||||| || ||||| |||||| ||| | | | || || Sbjct 609733 AACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAAAGAGTACGACCATCCTC 609792 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 || || || ||||| | ||||| || || ||||| ||||| || || || || Sbjct 609793 CAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTG 609852 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| || ||| ||| | || || || || | || || || | ||| || || || Sbjct 609853 AATCTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTT 609912 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || |||| |||||| || ||||||||||| Sbjct 609913 TCCGGTCAAAGTTTTAACGAAAATTTGCAT 609942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362177443204518