Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq383 131 4e-25 seq320 114 3e-20 >seq383 Length=466833 Score = 131 bits (144), Expect = 4e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | ||| || || || | || || || || || |||||||| ||| Sbjct 193722 ATACCACCTCGCAGACGAAGGACAAGGTGGAGGGTCGACTCCTTTTGGATATTATAATCA 193663 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || | |||||| ||||| || || || || || || || | |||||| || || Sbjct 193662 CTCAAGGTACGACCGTCCTCTAGCTGCTTACCGGCGAAGATAAGGCGCTGTTGGTCTGGG 193603 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| |||||||||||||| | || || || || | ||||| || || Sbjct 193602 GGGATGCCTTCCTTATCCTGAATCTTACCCTTCACGTTGTCGATCGTATCCGAAGACTCG 193543 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || |||||||| ||||| ||||| ||||| ||||| |||||||| Sbjct 193542 ACCTCGAGAGTAATAGTTTTACCGGTAAGGGTTTTGACAAAAATCTGCAT 193493 Score = 114 bits (126), Expect = 3e-20 Identities = 146/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | ||||| |||||||| ||||||||||| || ||||| | || ||| Sbjct 193184 AGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAGAGAGTGCGCCCATCT 193125 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || ||||| || || ||||| | | ||| || || ||||| || |||||||| || Sbjct 193124 TCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGAATCCCTTCTTTGTCT 193065 Query 104468 TGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAG 104525 || ||| ||||| || ||||| || | ||| || | ||| || ||||| | || || | Sbjct 193064 TGGATC-TTGCTCTTCACATTGTCGATGGTGTC-CGAGGACTCAACCTCCAAAGTGATGG 193007 Query 104526 TCTTACCAGTAAGTGT 104541 |||| || |||| ||| Sbjct 193006 TCTTTCCGGTAACTGT 192991 Score = 105 bits (116), Expect = 2e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 |||| || || || || || ||||||||||| | ||| | || || || | || Sbjct 193923 TGTAGAGTTGACTCCTTTTGGATATTATAGTCGCTCAAAGTACGTCCATCCTCCAACTGC 193864 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || |||||||| || || | |||||||| || || || || || |||||||| || || Sbjct 193863 TTACCAGCAAAGATAAGACGTTGTTGATCTGGGGGGATACCCTCCTTATCCTGGATTTTA 193804 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | || || || || | |||||| || ||| || || | ||||| || || |||||| Sbjct 193803 CCCTTGACGTTGTCAATAGTATCGGAAGATTCGACTTCCAAAGTAATGGTTTTTCCAGTA 193744 Query 104537 AGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| |||||||| Sbjct 193743 AGGGTTTTGACAAAAATCTGCAT 193721 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | ||| || || || | ||||| ||||||||||| || ||||| Sbjct 193494 ATACCACCTCGCAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCG 193435 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || ||||| || ||||| | ||| || || ||||| || || | || ||||| ||| Sbjct 193434 GAGAGGGTTCTGCCATCTTCCAATTGCTTGCCGGCAAATATCAGACGTTGCTGATCTGGA 193375 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || || || ||||| || |||| ||||| || | || || || || Sbjct 193374 GGAATGCCCTCCTTGTCTTGAATTTTGCCTTTGACATTATCGATTGTGTCCGAAGACTCG 193315 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535 || || || || || ||||| || || Sbjct 193314 ACTTCAAGAGTGATTGTCTTTCCGGT 193289 >seq320 Length=806987 Score = 114 bits (126), Expect = 3e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| ||||| || || ||||| | ||| || || | || || ||| Sbjct 609746 GTGGACTCTTTCTGAATGTTATAATCGGAAAGAGTACGACCATCCTCCAACTGCTTACCA 609805 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | | ||| || || ||||| || || || |||||||||||||| | || Sbjct 609806 GCAAAGATCAAGCGCTGCTGGTCTGGAGGAATACCCTCCTTATCCTGAATCTTCGACTTG 609865 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | || || || || ||||| || || |||||||| || || | ||| Sbjct 609866 ACATTGTCGATTGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTTCCGGTCAAAGTT 609925 Query 104543 TTTACAAATATCTGCATT 104560 || || || || |||||| Sbjct 609926 TTAACGAAAATTTGCATT 609943 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | ||| || | || | || || ||||||||||| ||||| || Sbjct 610169 ATTCCGCCACGAAGACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCG 610228 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | ||| || || ||||| || || || ||||| | | ||| || || || Sbjct 610229 GAAAGGGTACGACCATCCTCAAGTTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCTGGG 610288 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || |||||||| ||||||| || ||||| || | ||||| || || Sbjct 610289 GGGATGCCCTCCTTATCCTGGATCTTTGACTTGACATTGTCAATAGTATCAGAAGACTCC 610348 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGT 104535 ||||| || || || ||||| ||||| Sbjct 610349 ACCTCGAGGGTGATTGTCTTGCCAGT 610374 Score = 91.5 bits (100), Expect = 3e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | ||||| || || || || || || || || || || | ||||| Sbjct 610470 AGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGAGAGGGTGCGTCCGTCC 610529 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || ||||||||||| || | | || ||||| ||||| ||||| || || ||| Sbjct 610530 TCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCCCTCCTTGTCC 610589 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| | || || || || | || || | ||| ||||| || ||||| || Sbjct 610590 TGAATCTTAGACTTGACGTTGTCGATAGTGTCCGACGATTCCACCTCAAGGGTAATGGTT 610649 Query 104528 TTACCAGT 104535 || ||||| Sbjct 610650 TTTCCAGT 610657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151392528587784