Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq383 96.9 3e-15 >seq383 Length=466833 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 ||||||||| || || |||||| ||| || ||||||| |||||||||||| || | Sbjct 193684 CTCCTTTTGGATATTATAATCACTCAAGGTACGACCGTCCTCTAGCTGCTTACCGGCGAA 193625 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652 || | ||||| || || || | | |||||| ||| ||| || ||| | | Sbjct 193624 GATAAGGCGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGAATCTTACCCTTCACGTT 193565 Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712 | || || ||||| | |||||| ||||| || || ||||||||||| || ||||| Sbjct 193564 GTCG--ATCGTATCCGAAGACTCGACCTCGAGAGTAATAGTTTTACCGGTAAGGGTTTTG 193507 Query 48713 ACAAAAATCTGCAT 48726 |||||||||||||| Sbjct 193506 ACAAAAATCTGCAT 193493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421249156668398