Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq383 129 5e-25 seq320 107 2e-18 >seq383 Length=466833 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| || |||||||| | ||||| ||||||| ||| ||||||| Sbjct 193929 ACCAAGTGTAGAGTTGACTCCTTTTGGATATTATAGTCGCTCAAAGTACGTCCATCCTCC 193870 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||| || || ||||||| | | ||| |||||||| || ||||| || || || | Sbjct 193869 AACTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGGGGGATACCCTCCTTATCCTGG 193810 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 ||||| |||||||| | | | ||| || | ||||| || | || ||||||||| Sbjct 193809 ATTTTACCCTTGACGTTGTCAATAGTATCGGAAGATTCGACTTCCAAAGTAATGGTTTTT 193750 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| ||||| ||||| |||||||| Sbjct 193749 CCAGTAAGGGTTTTGACAAAAATCTGCAT 193721 >seq320 Length=806987 Score = 107 bits (118), Expect = 2e-18 Identities = 130/175 (74%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTC 94868 ||||| |||||||| | ||| ||||| | | || || | ||||| ||||| |||| Sbjct 610485 GTAGACTCCTTTTGGATGTTGTAATC--TGAGAGGGTGCGTCCGTCCTCAAGCTGCTTTC 610542 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 | ||||||| || | |||||||||||||||||| || || ||||| | ||| || | || Sbjct 610543 CAGCAAAGATCAAACGTTGCTGATCTGGAGGAATTCCCTCCTTGTCCTGAATCTTAGACT 610602 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 ||||| | ||| |||||| | || || |||| || |||||||||||||| Sbjct 610603 TGACGTTGTCGATAGTGTCCGACGATTCCACCTCAAGGGTAATGGTTTTTCCAGT 610657 Score = 100 bits (110), Expect = 3e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||||||| | || || || || || | |||||||||| | || || || ||||| Sbjct 609734 ACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGG--AAAGAGTACGACCATCCT 609791 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 ||| ||| || || ||||||| || | ||||| |||||||||||||| || || || | Sbjct 609792 CCAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGAATACCCTCCTTATCCT 609851 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||| || | |||||| | ||| ||||||| || || || | ||||| || | Sbjct 609852 GAATCTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCT 609911 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || | |||||| || || || ||||| Sbjct 609912 TTCCGGTCAAAGTTTTAACGAAAATTTGCAT 609942 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||| ||||| || | ||| ||||| | || | |||||| ||||| ||||| Sbjct 609974 GTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTACGGCCATCCTCAAGCTGCTTTCCA 610033 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| |||| |||||| |||||||||||||| || || || | ||||| | |||| Sbjct 610034 GCGAAGATCAATCGTTGCTGGTCTGGAGGAATACCCTCCTTATCTTGGATTTTCGACTTG 610093 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | | | ||||| | | ||||| || | ||||| || || || || | || Sbjct 610094 ACGTTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATTGTCTTGCCGGTTAAGGTC 610153 Query 94991 TTCACAAAGATCTGCAT 95007 || |||||||| ||||| Sbjct 610154 TTGACAAAGATTTGCAT 610170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448288969751280