Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq209 95.1 2e-15 seq102 80.6 4e-11 >seq209 Length=989935 Score = 95.1 bits (104), Expect = 2e-15 Identities = 83/101 (82%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| |||||| || ||||| || || ||||||||||| ||||| Sbjct 708976 GCCAAGCGTCACAGGAAGAT-TCTTCGTGACAACATTCAGGGTATCACCAAGCCCGCTAT 709034 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 |||||||| || ||||||||||| || |||||| |||||| Sbjct 709035 TCGTCGTCTCGCACGTCGTGGTGGTGTTAAGCGTATCTCTG 709075 >seq102 Length=185098 Score = 80.6 bits (88), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| || ||||||||||| ||||||||||| ||||||||||| || ||||||||| |||| Sbjct 126532 AGGTATTACCAAGCCAGCCATCCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTC 126591 Query 16531 TG 16532 || Sbjct 126592 TG 126593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074836105814