Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq342 95.1 2e-14 >seq342 Length=727325 Score = 95.1 bits (104), Expect = 2e-14 Identities = 350/541 (65%), Gaps = 13/541 (2%) Strand=Plus/Plus Query 62721 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTC--AGCTTCTG 62778 || ||||||||||||| ||| | ||||||||| ||| | || | |||| ||| || | Sbjct 60458 AAACCTTGAACACCAACACCAACAGGTCTATGCCTCGTGTT--ACTTTTCCTAGCCTCAG 60515 Query 62779 GAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCA 62838 | | ||||| | || | ||| || || || ||||| ||| ||| | || ||| || Sbjct 60516 GGACGGGATAGAAGTTGACATCGATGATCTTGTTGAGGTTTTTGATGACGACCTTGGTCA 60575 Query 62839 CATCCTTCAGTTTGAGAAAATC-AAATCGCCCATCT-ATTACAAACATGT----TCAAGG 62892 | || | || ||| ||||| | |||||| ||| | | ||||| | ||||| Sbjct 60576 CCTCGTGCAACTTGGCGAAATCGTACTCGCCCCTCTGAACATCAACATATGTAGGCAAGG 60635 Query 62893 CAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAG 62952 | | ||||||| ||||||||| || ||||||| || | ||| | | ||||| | Sbjct 60636 CCAACGATGCCAAATTACAAACTGCGACCTCATCAGGTGCACTATACTCCACAATCTCGG 60695 Query 62953 TGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACG 63012 | || ||||| | | || ||||| || || || || || || |||||| | Sbjct 60696 TACAGAGATTGGACGATCTAATGGTTCCCAAGTTCTGCTGGTTGGATTTGCGGTTACATG 60755 Query 63013 CATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCC 63072 | ||||| || || ||||| || | ||||| ||| | || | ||| | ||| | || Sbjct 60756 CGTCCTTGTAGAGCATGAAAGGGTTGCCAGTCTCAGTTTGGGCTTCGAGAATGTGATACC 60815 Query 63073 AGACGACTCGAGCCTTTAT--TATAGATTTGTATCTCCTTTCTCTT-TCGTATAGTGTAT 63129 ||| | | || || || | | | | || || | || || ||| ||| Sbjct 60816 AGAGTTTTTGCGCTTTGATGGTCTTGCGAGCAAGGTCTTTAGTATTCTCATATTTGTTAT 60875 Query 63130 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACA 63189 | | ||||| || || |||||||| | | |||| || || ||||| ||||| | Sbjct 60876 AGAGAGCCTCGAATTCTTCACCCCAAACGTCGGCCAAACCTGGGGCTTCATTAGGACAAA 60935 Query 63190 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63249 | |||||| | | ||| |||| ||||| || |||||||| |||||||||| Sbjct 60936 AGAGGCTCCACTCGGCATTTGCCTCAACTCTCTTCATGAATAGATCAGGGATCCAAAGAG 60995 Query 63250 C 63250 | Sbjct 60996 C 60996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622944100837680