Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq342 102 2e-16 >seq342 Length=727325 Score = 102 bits (112), Expect = 2e-16 Identities = 247/369 (67%), Gaps = 5/369 (1%) Strand=Plus/Minus Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984 || ||| | ||| ||||||| || |||||| | |||| | || |||||| | || ||| Sbjct 61017 CGCGCAAGAGATTTGTTCTACGCTCTTTGGATCCCTGATCTATTCATGAAGAGAGTTGAG 60958 Query 363985 GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 ||| | | ||| |||||||| || | ||| |||||| | |||| || ||| Sbjct 60957 GCAAATGCCGAGTGGAGCCTCTTTTGTCCTAATGAAGCCCCAGGTTTGGCCGACGTTTGG 60898 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGA--ATCGGAGGGAAAG-GCTCGTAAG 364101 ||||| || | | ||||| || | || ||||| || | || ||||| ||| Sbjct 60897 GGTGAAGAATTCGAGGCTCTCTATAACAAATATGAGAATACTAAAGACCTTGCTCGCAAG 60838 Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161 || || || || || || |||| | ||| | || | || | |||||| || | | Sbjct 60837 ACCATCAAAGCGCAAAAACTCTGGTATCACATTCTCGAAGCCCAAACTGAGACTGGCA-A 60779 Query 364162 CCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220 |||| | ||| | ||||| || | || |||||||| |||||||||||| || | || || Sbjct 60778 CCCTTTCATGCTCTACAAGGACGCATGTAACCGCAAATCCAACCAGCAGAACTTGGGAAC 60719 Query 364221 AATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGC 364280 ||| | ||| || |||||||||||| | || || | || || || ||| || Sbjct 60718 CATTAGATCGTCCAATCTCTGTACCGAGATTGTGGAGTATAGTGCACCTGATGAGGTCGC 60659 Query 364281 CGTATGTAA 364289 || ||||| Sbjct 60658 AGTTTGTAA 60650 Score = 89.7 bits (98), Expect = 1e-12 Identities = 236/358 (66%), Gaps = 2/358 (1%) Strand=Plus/Minus Query 364656 TGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGT 364715 |||||| ||||||||||| || ||| ||| | |||||| | | || || Sbjct 60218 TGATCTCTGGAATGTCACCCCCACTGAATTGTGGGATTGGGATGAGTTGAAAGAGAAGGT 60159 Query 364716 TAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGC 364775 || ||||| || || || ||||| || || || |||||||| ||||| || | Sbjct 60158 CAAAAAGCACGGCCTCCGTAATTCCCTTCTTGTGGCTCCTATGCCCACCGCTTCGACCTC 60099 Query 364776 ACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCG 364835 |||||| | ||| ||||||||| || || || | ||| || ||||||| || || Sbjct 60098 TCAGATCTTGGGATTCAACGAGTGTTTTGAGCCTTATACCTCGAACATTTATTCCCGTCG 60039 Query 364836 GGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCG 364895 ||| | | || || |||| | || || | | | |||||||| ||| Sbjct 60038 AGTTTTGGCTGGCGAGTTTCAAATTGTCAACCCTTGGTTGTTGAAGGATCTCGTTGACAT 59979 Query 364896 CGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAA 364955 || ||||| | || | ||||||||| |||||| || | ||||| | | ||||| Sbjct 59978 GGGATTGTGGAGCGATAACATGAAGAATCGTATCATTGCGGAGAATGGCAGTATCCAGAA 59919 Query 364956 CATTCCAGGAT-TTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC 365012 | ||| | || |||| || ||| | || || ||||||| ||||| |||||||| || Sbjct 59918 TA-TCCCGAATATTCCGGATGATATCAAAGCTCTTTACAAGACCGTTTGGGAAATCTC 59862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303346953711236