Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq383 143 3e-29 seq320 116 3e-21 seq342 107 2e-18 >seq383 Length=466833 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||||||||||||||| || || ||||| ||| Sbjct 193719 CCACCTCGCAGACGAAGGACAAGGTGGAGGGTCGACTCCTTTTGGATATTATAATCACTC 193660 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||||||||||||| || ||| |||| | ||||| ||||| || ||| Sbjct 193659 AAGGTACGACCGTCCTCTAGCTGCTTACCGGCGAAGATAAGGCGCTGTTGGTCTGGGGGG 193600 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || || || ||| | | || | ||||| | ||||||| Sbjct 193599 ATGCCTTCCTTATCCTGAATCTTACCCTTCACGTTGTCGATCGTATCCGAAGACTCGACC 193540 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||||||||||| || ||||| || ||||||||||| Sbjct 193539 TCGAGAGTAATAGTTTTACCGGTAAGGGTTTTGACAAAAATCTGCAT 193493 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || |||| || ||||||||||| || || || |||||| Sbjct 193947 CCACCACGAAGACGGAGAACCAAGTGTAGAGTTGACTCCTTTTGGATATTATAGTCGCTC 193888 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| | |||||| || || |||| | ||| || || || || ||| Sbjct 193887 AAAGTACGTCCATCCTCCAACTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGGGGG 193828 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || |||||| ||||| | || | |||||||| || |||| Sbjct 193827 ATACCCTCCTTATCCTGGATTTTACCCTTGACGTTGTCAATAGTATCGGAAGATTCGACT 193768 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| |||||| || || || ||||| || ||||||||||| Sbjct 193767 TCCAAAGTAATGGTTTTTCCAGTAAGGGTTTTGACAAAAATCTGCAT 193721 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| |||||| || | ||| | ||| ||||| || || || || || ||| Sbjct 193199 CCGCCACGCAGACGCAGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAG 193140 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || ||||| || || ||| | || |||||||||||||| ||||| Sbjct 193139 AGAGTGCGCCCATCTTCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGA 193080 Query 131128 ATTCCTTCTTTGTC 131141 || ||||||||||| Sbjct 193079 ATCCCTTCTTTGTC 193066 >seq320 Length=806987 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | ||| | ||| |||||||| |||||||||||||| Sbjct 609944 CCACCACGAAGTCGAAGGACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGAG 610003 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| |||||||| || ||| |||| || || |||||||| ||||| Sbjct 610004 AGGGTACGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAATCGTTGCTGGTCTGGAGGA 610063 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||||||| ||||| | || | || || | |||||||| Sbjct 610064 ATACCCTCCTTATCTTGGATTTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACC 610123 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || ||||||| || || || || || ||||| Sbjct 610124 TCGAGGGTGATTGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCAT 610170 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 131005 GAGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCG 131064 || || || || | ||| || || || || | ||| ||||| || |||||||| |||||| Sbjct 609713 GACCCGCCACGAAGACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCG 609772 Query 131065 CTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGA 131124 | || || ||||| | |||||| || || |||| || ||||||||||| ||| Sbjct 609773 GAAAGAGTACGACCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGA 609832 Query 131125 GGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCG 131184 || || || || || || || ||| ||||| | || | || || | ||||| Sbjct 609833 GGAATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCC 609892 Query 131185 ATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | |||| ||| | || || ||||| | |||||| |||||||| ||||| Sbjct 609893 ACCTCGAGGGTGATAGTCTTTCCGGTCAAAGTTTTAACGAAAATTTGCAT 609942 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | ||| | ||| ||||||||||| ||||||||||| Sbjct 610455 CCGCCACGAAGACGGAGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGAG 610514 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || || |||| ||||| ||||| || ||||| Sbjct 610515 AGGGTGCGTCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGA 610574 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| || || ||||| | || | ||| || | || || | Sbjct 610575 ATTCCCTCCTTGTCCTGAATCTTAGACTTGACGTTGTCGATAGTGTCCGACGATTCCACC 610634 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||||| |||||| || || Sbjct 610635 TCAAGGGTAATGGTTTTTCCAGT 610657 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || || || | ||| ||||| || |||||||| |||||| Sbjct 610172 CCGCCACGAAGACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAA 610231 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| || |||||||| ||| | || || ||||||||||| || ||| Sbjct 610232 AGGGTACGACCATCCTCAAGTTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCTGGGGGG 610291 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | |||||| | ||||| | Sbjct 610292 ATGCCCTCCTTATCCTGGATCTTTGACTTGACATTGTCAATAGTATCAGAAGACTCCACC 610351 Query 131188 TCGACGGTAACGGTTTTACCGGTTA 131212 |||| ||| | || || || |||| Sbjct 610352 TCGAGGGTGATTGTCTTGCCAGTTA 610376 >seq342 Length=727325 Score = 107 bits (118), Expect = 2e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| | ||||||||||| ||||| || ||||| |||| | ||| || || | || Sbjct 60009 TTGACAATTTGAAACTCGCCAGCCAAAACTCGACGGGAATAAATGTTCGAGGTATAAGGC 60068 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 |||||| ||||||| |||| ||| |||| ||||| ||||||||||| ||||| Sbjct 60069 TCAAAACACTCGTTGAATCCCAAGATCTGAGAGGTCGAAGCGGTGGGCATAGGAGCCACA 60128 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCA 145236 | | ||||| || ||||||||||| |||| | || || | | | |||||||||| Sbjct 60129 AGAAGGGAATTACGGAGGCCGTGCTTTTTGACCTTCTCTTTCAACTCATCCCAATCCCA 60187 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 145624 GGCGATCGACGCCAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTC 145683 ||| | ||| ||||||||||||||||| ||| || | | || || | || ||||| Sbjct 60634 GGCCAACGATGCCAAATTACAAACTGCGACCTCATCAGGTGCACTATACTCCACAATCTC 60693 Query 145684 GGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCA 145743 || || | |||| || | |||||||||| || ||||| || ||| | ||| || Sbjct 60694 GGTACAGAGATTGGACGATCTAATGGTTCCCAAGTTCTGCTGGTTGGATTTGCGGTTACA 60753 Query 145744 CGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTC 145779 |||||||||||||||||| | || ||||||||| Sbjct 60754 TGCGTCCTTGTAGAGCATGAAAGGGTTGCCAGTCTC 60789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010451736320