Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq383 86.0 5e-12 >seq383 Length=466833 Score = 86.0 bits (94), Expect = 5e-12 Identities = 161/236 (68%), Gaps = 3/236 (1%) Strand=Plus/Minus Query 16703 ATTTAC---CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTG 16759 |||||| || || || || | || |||| || || || ||||||||||| || || Sbjct 193956 ATTTACATACCACCACGAAGACGGAGAACCAAGTGTAGAGTTGACTCCTTTTGGATATTA 193897 Query 16760 TAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGG 16819 |||||| || || | |||||||| || || || ||| | ||||| || ||||| Sbjct 193896 TAGTCGCTCAAAGTACGTCCATCCTCCAACTGCTTACCAGCAAAGATAAGACGTTGTTGA 193837 Query 16820 TCCACAGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCG 16879 || || | ||||| || || |||| ||| || | | | | ||| ||| Sbjct 193836 TCTGGGGGGATACCCTCCTTATCCTGGATTTTACCCTTGACGTTGTCAATAGTATCGGAA 193777 Query 16880 GGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || ||||||||||| || || |||||||||||||||||||| Sbjct 193776 GATTCGACTTCCAAAGTAATGGTTTTTCCAGTAAGGGTTTTGACAAAAATCTGCAT 193721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405086035070020