Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq342 134 2e-26 >seq342 Length=727325 Score = 134 bits (148), Expect = 2e-26 Identities = 351/525 (67%), Gaps = 8/525 (2%) Strand=Plus/Plus Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 ||||| | ||||| || |||| ||| || || | | || || | ||||| |||||| Sbjct 61118 ATATCCGCGTGCCATGGCTCCATGTAGATAGCAAAGGCCCCGGGTCTCTTGTTGCCTCCC 61177 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 || || | || || ||||| | |||| | ||||| |||||||| | ||| || || || Sbjct 61178 TGGTCAACATACCTGGCGGTATGATTAAACACTCTTAACATTGGCACAATGCCGTTAGAA 61237 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 63351 ||||||||||||| | |||||| ||| | |||||||| | | | || | || || Sbjct 61238 CTACCATTGGTCCCGGCAATATAGGAACCAGTAGCACGAAT-GCAGTGAATGTTGAGTCC 61296 Query 63352 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCT 63410 || || || || |||| || || | || || || |||| ||||| || || || | Sbjct 61297 AATACCGCCAGCAGTTTTTGAAATCATAGCACA-GGTCTTAAGGGTATCGTAAATACCAT 61355 Query 63411 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA-CTAGTT 63469 | || || | |||| ||| | |||||| || | || | | ||| || Sbjct 61356 CAATCGAGTCCCCTTTCATAGTAACCAAGAAACAGGACGAGAGTT-GAGGCGATGGTGTG 61414 Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTAC 63529 || ||||| || | ||||| ||||| || ||||| | ||| ||| || || || Sbjct 61415 CCTGCATTGAAGAGAGTAGGCGAAGCATGGGTAAAATACTTTGAAGACGTGAGGTTATAT 61474 Query 63530 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63589 ||||| ||| | ||| | |||| | ||||||||| || || |||||||| | ||| Sbjct 61475 GTCTCGATAACCTTGTCGACATCCTCTCCATGAATTCCGACAGCCACACGCATAAGCATA 61534 Query 63590 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA-GTAGGATTTTTCCAAAGT 63648 |||||||| | ||| | | ||| | || | || || ||| || |||||||| Sbjct 61535 TGCTGAGGACGCTCAGC-AACTTTTCCATTGATGCGAAGAAGGTACGAACGCTCCAAAGT 61593 Query 63649 TTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63693 ||| || ||||| || ||||| ||| || ||||| ||||| Sbjct 61594 TTTGAAGCCAAAGTAATTGTAGTTAAAATCCTTATCGTAGATAAT 61638 Score = 95.1 bits (104), Expect = 2e-14 Identities = 350/541 (65%), Gaps = 13/541 (2%) Strand=Plus/Plus Query 62576 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTC--AGCTTCTG 62633 || ||||||||||||| ||| | ||||||||| ||| | || | |||| ||| || | Sbjct 60458 AAACCTTGAACACCAACACCAACAGGTCTATGCCTCGTGTT--ACTTTTCCTAGCCTCAG 60515 Query 62634 GAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCA 62693 | | ||||| | || | ||| || || || ||||| ||| ||| | || ||| || Sbjct 60516 GGACGGGATAGAAGTTGACATCGATGATCTTGTTGAGGTTTTTGATGACGACCTTGGTCA 60575 Query 62694 CATCCTTCAGTTTGAGAAAATC-AAATCGCCCATCT-ATTACAAACATGT----TCAATG 62747 | || | || ||| ||||| | |||||| ||| | | ||||| | ||| | Sbjct 60576 CCTCGTGCAACTTGGCGAAATCGTACTCGCCCCTCTGAACATCAACATATGTAGGCAAGG 60635 Query 62748 CAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAG 62807 | | ||||||| ||||||||| || ||||||| || | ||| | | ||||| | Sbjct 60636 CCAACGATGCCAAATTACAAACTGCGACCTCATCAGGTGCACTATACTCCACAATCTCGG 60695 Query 62808 TGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACG 62867 | || ||||| | | |||||||| || || || || || || |||||| | Sbjct 60696 TACAGAGATTGGACGATCTAATGGTTCCCAAGTTCTGCTGGTTGGATTTGCGGTTACATG 60755 Query 62868 CATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCC 62927 | ||||| || || ||||| || | ||||| ||| | || | ||| | ||| | || Sbjct 60756 CGTCCTTGTAGAGCATGAAAGGGTTGCCAGTCTCAGTTTGGGCTTCGAGAATGTGATACC 60815 Query 62928 AGACGACTCGAGCCTTTAT--TATAGATTTGTATCTCTTTTCTCTT-TCGTATAGTGTAT 62984 ||| | | || || || | | | | ||||| | || || ||| ||| Sbjct 60816 AGAGTTTTTGCGCTTTGATGGTCTTGCGAGCAAGGTCTTTAGTATTCTCATATTTGTTAT 60875 Query 62985 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACA 63044 | | ||||| || || |||||||| | | ||| || || ||||| ||||| | Sbjct 60876 AGAGAGCCTCGAATTCTTCACCCCAAACGTCGGCCAAACCTGGGGCTTCATTAGGACAAA 60935 Query 63045 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63104 | |||||| | | ||| |||| ||||| || |||||||| |||||||||| Sbjct 60936 AGAGGCTCCACTCGGCATTTGCCTCAACTCTCTTCATGAATAGATCAGGGATCCAAAGAG 60995 Query 63105 C 63105 | Sbjct 60996 C 60996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633628847680800