Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq320 125 6e-24 seq383 109 5e-19 >seq320 Length=806987 Score = 125 bits (138), Expect = 6e-24 Identities = 160/216 (74%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || || ||||||||||| || | ||||| |||| |||||||| || Sbjct 609943 AATGCAAATTTTCGTTAAAACTTTGACCGGAAAGACTATCACCCTCGAGGTGGAGTCTTC 609884 Query 25058 TGACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||| ||||| || || ||| | || | ||| || || || || ||||| || || Sbjct 609883 TGACACAATCGA--CAATGTCAAGTCGAAGATTCA-GGATAAGGAGGGTATTCCTCCAGA 609827 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||| ||||| | || ||||| || || || || || |||| ||| ||| | |||||| Sbjct 609826 CCAGCAGCGCTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGTCGTACTCTTTCCGATTA 609767 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| ||||| ||||| || || || || || Sbjct 609766 TAACATTCAGAAAGAGTCCACCCTTCACTTGGTTCT 609731 >seq383 Length=466833 Score = 109 bits (120), Expect = 5e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAA 25082 ||||| || ||||||| | || || ||||| || ||||| ||||| ||||| Sbjct 192997 ACCGGAAAGACCATCACTTTGGAGGTTGAGTCCTCGGACACCATCGACAATGTGAAGAGC 193056 Query 25083 AAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAA 25142 || ||| ||||||||||||||||| || ||||| ||||| | ||||| ||||| ||| Sbjct 193057 AAGATCCAAGACAAAGAAGGGATTCCTCCAGACCAGCAGCGTTTGATTTTCGCCGGTAAA 193116 Query 25143 CAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACAT 25202 || | ||||||| |||||| | ||| || ||||| || ||||| || || || ||| Sbjct 193117 CAGCTCGAAGATGGGCGCACTCTCTCCGACTATAATATCCAGAAAGAGTCTACCCTTCAT 193176 Query 25203 TTAGTGCT 25210 | || || Sbjct 193177 CTTGTCCT 193184 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || || | ||||||||| | || || |||| || ||||| || Sbjct 193493 ATGCAGATTTTTGTCAAAACCCTTACCGGTAAAACTATTACTCTCGAGGTCGAGTCTTCG 193552 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| ||||| || || || || ||||| || || || |||||| Sbjct 193553 GATACGATCGACAACGTGAAGGGTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAA 193612 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| || ||||| || || |||| || | ||| || || | ||||| ||| Sbjct 193613 CAGCGCCTTATCTTCGCCGGTAAGCAGCTAGAGGACGGTCGTACCTTGAGTGATTATAAT 193672 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || ||||| || || || || || Sbjct 193673 ATCCAAAAGGAGTCGACCCTCCA 193695 Score = 89.7 bits (98), Expect = 4e-13 Identities = 132/185 (71%), Gaps = 8/185 (4%) Strand=Plus/Plus Query 25021 TGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGA----GTCACTG 25076 ||||||| || | ||||| | ||||| ||||| || ||||| ||||| |||| Sbjct 193287 TGACCGGAAAGACAATCACTCTTGAAGTCGAGTCTTCGGACACAATCGATAATGTCA--- 193343 Query 25077 AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCC 25136 ||| |||| ||| ||||| || || ||||| || || || || || | || |||||| Sbjct 193344 AAGGCAAAATTCAA-GACAAGGAGGGCATTCCTCCAGATCAGCAACGTCTGATATTTGCC 193402 Query 25137 GGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACG 25196 ||||| ||||| ||||||| | || | ||| ||||| ||||| ||||| || || Sbjct 193403 GGCAAGCAATTGGAAGATGGCAGAACCCTCTCCGACTACAACATTCAGAAAGAGTCTACC 193462 Query 25197 CTACA 25201 || || Sbjct 193463 CTCCA 193467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325898088370