Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq340 120 3e-22 >seq340 Length=732193 Score = 120 bits (132), Expect = 3e-22 Identities = 200/287 (70%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| |||||||| | || ||||| | ||||| || ||||||||||| |||||| Sbjct 108046 ATGTAGGTATCGATGAGAAGGGAATAGGTCTCAGAGTGCACATTCTCCATCATAATTTGA 108105 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || ||||||||||| | || || | ||||| || || | | || | | || || Sbjct 108106 AAACCGTAGAAACAACGGGCCTCAGGAATCTGAACCTCGTTACTGAAGCGTTGAACAAGG 108165 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || |||||||| |||||||| || || |||||||| || | | ||| ||||||| Sbjct 108166 TTCTCATTGACAATACCATCAGACGCGGCAAAAAAGGCAAGAACGTGCGAGATAAAATAG 108225 Query 93542 TTCTCATCATC-TTTAAGC--TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 ||||||||| |||| || | ||| || | || ||||||||||| | || Sbjct 108226 CGCTCATCATCATTTAGGCGGTCGCTCCAGTCATGCATGTCCTTTGAAAGATCAATCTCC 108285 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 || || ||| || || || || ||||| |||||||| | ||| || Sbjct 108286 TCAGCAACCCAGAAGGAGGCCTCAGCTTTCTTGTACATTTGCCAAAT 108332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858029617520