Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq383 154 3e-32 seq320 150 3e-31 seq98 100 5e-16 seq43 84.2 4e-11 >seq383 Length=466833 Score = 154 bits (170), Expect = 3e-32 Identities = 175/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | || || ||||| || | ||||||||||| || ||||| |||||||| |||| Sbjct 193955 TTTACATACCACCACGAAGACGGAGAACCAAGTGTAGAGTTGACTCCTTTTGGATATTAT 193896 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | ||| | || | ||||| || |||||||| || || || || || | |||||| | Sbjct 193895 AGTCGCTCAAAGTACGTCCATCCTCCAACTGCTTACCAGCAAAGATAAGACGTTGTTGAT 193836 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || || || || ||||| || || || || |||||||| || || || || | | Sbjct 193835 CTGGGGGGATACCCTCCTTATCCTGGATTTTACCCTTGACGTTGTCAATAGTATCGGAAG 193776 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| |||||||| || ||||||||||| || ||||| ||||| || |||||||| Sbjct 193775 ATTCGACTTCCAAAGTAATGGTTTTTCCAGTAAGGGTTTTGACAAAAATCTGCAT 193721 Score = 140 bits (154), Expect = 6e-28 Identities = 155/204 (76%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || |||||||| || ||||| || |||||| Sbjct 193491 CCACCTCGCAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAG 193432 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || || |||||||| || ||||| ||||| ||||| || | ||| || || || ||| Sbjct 193431 AGGGTTCTGCCATCTTCCAATTGCTTGCCGGCAAATATCAGACGTTGCTGATCTGGAGGA 193372 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCC-TTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 ||||| |||||||||||||| |||||| ||||| ||||| ||||| | || || || Sbjct 193371 ATGCCCTCCTTGTCTTGAAT-TTTGCCTTTGACATTATCGATTGTGTCCGAAGACTCGAC 193313 Query 68414 TTCCAAGGTGATGGTTTTTCCCGT 68437 ||| | ||||| || ||||| || Sbjct 193312 TTCAAGAGTGATTGTCTTTCCGGT 193289 Score = 136 bits (150), Expect = 7e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| || | || || || |||||||| ||||| ||||| |||||| Sbjct 193199 CCGCCACGCAGACGCAGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAG 193140 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||||||| | ||| || |||||||| || | | || ||||| || ||| Sbjct 193139 AGAGTGCGCCCATCTTCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGGA 193080 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| |||||||| ||||| ||| || ||||||||||| | || || || Sbjct 193079 ATCCCTTCTTTGTCTTGGATCTTGCTCTTCACATTGTCGATGGTGTCCGAGGACTCAACC 193020 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 ||||| |||||||| ||||| || Sbjct 193019 TCCAAAGTGATGGTCTTTCCGGT 192997 Score = 131 bits (144), Expect = 3e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || ||||| |||||||| |||||||| Sbjct 193719 CCACCTCGCAGACGAAGGACAAGGTGGAGGGTCGACTCCTTTTGGATATTATAATCACTC 193660 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || || |||| |||||| |||||||| || || | |||||||| || || Sbjct 193659 AAGGTACGACCGTCCTCTAGCTGCTTACCGGCGAAGATAAGGCGCTGTTGGTCTGGGGGG 193600 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||| || |||||||| |||| ||| ||||| || || | || || || Sbjct 193599 ATGCCTTCCTTATCCTGAATCTTACCCTTCACGTTGTCGATCGTATCCGAAGACTCGACC 193540 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || ||||| || || ||||| ||||| || |||||||| Sbjct 193539 TCGAGAGTAATAGTTTTACCGGTAAGGGTTTTGACAAAAATCTGCAT 193493 >seq320 Length=806987 Score = 150 bits (166), Expect = 3e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || ||||||||||| || |||||||||||||| Sbjct 609716 CCGCCACGAAGACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAA 609775 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || |||||||| || || || || | | || ||||| || ||| Sbjct 609776 AGAGTACGACCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGA 609835 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || |||||||| | |||||| ||||| ||||| | || || || Sbjct 609836 ATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCCACC 609895 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | |||||| || ||||| || | || || ||||| || |||||| Sbjct 609896 TCGAGGGTGATAGTCTTTCCGGTCAAAGTTTTAACGAAAATTTGCATT 609943 Score = 131 bits (144), Expect = 3e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | || || || ||||| ||||||||||| ||||| ||| Sbjct 610455 CCGCCACGAAGACGGAGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGAG 610514 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || || || || | | ||| || || || ||| Sbjct 610515 AGGGTGCGTCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGGA 610574 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| |||||||| | ||||||| ||||| ||||| | ||||| || Sbjct 610575 ATTCCCTCCTTGTCCTGAATCTTAGACTTGACGTTGTCGATAGTGTCCGACGATTCCACC 610634 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||| ||||||||||| |||| Sbjct 610635 TCAAGGGTAATGGTTTTTCCAGTGA 610659 Score = 127 bits (140), Expect = 4e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || ||||| || | |||||||| || ||||||||||| || ||||||||||||| Sbjct 610170 TTCCGCCACGAAGACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGG 610229 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | ||||| || | ||||| |||||||| || | | || ||||| || | Sbjct 610230 AAAGGGTACGACCATCCTCAAGTTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCTGGGG 610289 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | ||||| ||||| || || ||||||| |||||| || || || || | || || | Sbjct 610290 GGATGCCCTCCTTATCCTGGATCTTTGACTTGACATTGTCAATAGTATCAGAAGACTCCA 610349 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGT 68437 | || | |||||| || || || || Sbjct 610350 CCTCGAGGGTGATTGTCTTGCCAGT 610374 >seq98 Length=1126903 Score = 100 bits (110), Expect = 5e-16 Identities = 124/167 (74%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 68297 TGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAAT 68356 ||| || |||||||| | |||||||| || ||||| | || || || || || || || Sbjct 1023248 TGTTCTTCCATCTTCGAGTTGCTTCCCAGCAAATATCAACCTCTGCTGATCCGGAGGGAT 1023307 Query 68357 GCCTTCCTTGTCTTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCTGATTCTACTT 68415 || ||||| ||||| || ||||| |||||| || || || |||| ||||| | Sbjct 1023308 CCCCTCCTTATCTTGGAT-TTTGCTCTTGACATTGTCAATTGTATCTGAGCTCTCTACCT 1023366 Query 68416 CCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||||||||||| || || || | ||||| ||||| ||||||||| Sbjct 1023367 CCAAGGTGATGGTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCATT 1023413 >seq43 Length=1216419 Score = 84.2 bits (92), Expect = 4e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 224500 CGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGG 224559 |||||| || ||||| || ||||| | |||||||| ||||||||||| | || || || Sbjct 15856 CGCGCCTAGGGACTCCCGATCAAGATAATTCGTCGGTTCATCCAGGATTAGAAGATGCGG 15915 Query 224560 GCACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCG 224619 |||||| |||||| | | || | || || |||||||||||||| ||||||| Sbjct 15916 CTTAGGCCACATGGCTGCCGCGATAACAACTTTGACTTTCTGACCGCCAGAAAGGCCGCC 15975 Query 224620 GATC 224623 |||| Sbjct 15976 GATC 15979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921617814928560