Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq383 111 1e-19 seq320 95.1 1e-14 >seq383 Length=466833 Score = 111 bits (122), Expect = 1e-19 Identities = 168/238 (71%), Gaps = 2/238 (1%) Strand=Plus/Minus Query 114145 ATTTACAAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGT 114204 ||||||| |||| ||||| || | | ||| || |||| || || || ||||| || | Sbjct 193956 ATTTACA--TACCACCACGAAGACGGAGAACCAAGTGTAGAGTTGACTCCTTTTGGATAT 193899 Query 114205 TGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTT 114264 | || ||||||| |||||| ||| || | || |||||||| |||| ||||| |||| Sbjct 193898 TATAGTCGCTCAAAGTACGTCCATCCTCCAACTGCTTACCAGCAAAGATAAGACGTTGTT 193839 Query 114265 GGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGG 114324 | || || || || || || || || || || || | | |||| || |||| Sbjct 193838 GATCTGGGGGGATACCCTCCTTATCCTGGATTTTACCCTTGACGTTGTCAATAGTATCGG 193779 Query 114325 TGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||||||| |||| || | ||||| || || || ||||| |||||||||||||| Sbjct 193778 AAGATTCGACTTCCAAAGTAATGGTTTTTCCAGTAAGGGTTTTGACAAAAATCTGCAT 193721 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || ||||| || || ||||| |||| |||||| || || || || ||||| Sbjct 193689 GTCGACTCCTTTTGGATATTATAATCACTCAAGGTACGACCGTCCTCTAGCTGCTTACCG 193630 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || ||||||||||| || || |||||||| || || |||||| || Sbjct 193629 GCGAAGATAAGGCGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGAATCTTACCCTTC 193570 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | || || | || ||||| || | || | ||||| ||||| || ||| Sbjct 193569 ACGTTGTCGATCGTATCCGAAGACTCGACCTCGAGAGTAATAGTTTTACCGGTAAGGGTT 193510 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||||||||| Sbjct 193509 TTGACAAAAATCTGCAT 193493 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | || || | ||| | ||||| ||||| || || || || ||| Sbjct 193202 ATACCGCCACGCAGACGCAGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCG 193143 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || |||||| || |||||||| ||| | || | |||||| ||||| ||| Sbjct 193142 GAGAGAGTGCGCCCATCTTCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGA 193083 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| ||||| || | | || | |||||| | ||| || Sbjct 193082 GGAATCCCTTCTTTGTCTTGGATCTTGCTCTTCACATTGTCGATGGTGTCCGAGGACTCA 193023 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGT 114358 || |||| || | || || ||||| Sbjct 193022 ACCTCCAAAGTGATGGTCTTTCCGGT 192997 >seq320 Length=806987 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| |||| | || | ||| | ||||| || || |||||||||||||| Sbjct 609941 ATTCCACCACGAAGTCGAAGGACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAATCA 610000 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| ||| ||||| || || |||||| |||| | || || ||||| ||| Sbjct 610001 GAGAGGGTACGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAATCGTTGCTGGTCTGGA 610060 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || || || || || || | | |||| |||||| | ||| ||| Sbjct 610061 GGAATACCCTCCTTATCTTGGATTTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCG 610120 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || |||||||| | || || ||||| || ||||| Sbjct 610121 ACCTCGAGGGTGATTGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCAT 610170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420132362085576