Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq383 122 2e-22 seq340 89.7 1e-12 seq98 87.8 4e-12 seq320 84.2 5e-11 >seq383 Length=466833 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||||||||||||| | || ||||| || || || || || || || ||| Sbjct 193911 TCCTTTTGGATATTATAGTCGCTCAAAGTACGTCCATCCTCCAACTGCTTACCAGCAAAG 193852 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || ||||| |||||| |||||| || || || |||||||||||||| | || ||| Sbjct 193851 ATAAGACGTTGTTGA---TCTGGGGGGATACCCTCCTTATCCTGGATTTTACCCTTGACG 193795 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || |||| |||| ||||| ||||| | || || || || || || || || ||| Sbjct 193794 TTGTCAATAGTATCGGAAGATTCGACTTCCAAAGTAATGGTTTTTCCAGTAAGGGTTTTG 193735 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 193734 ACAAAAATCTGCAT 193721 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | || || |||||||||||||| || Sbjct 193719 CCACCTCGCAGACGAAGGACAAGGTGGAGGGTCGACTCCTTTTGGATATTATAATCACTC 193660 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 | || || ||||| |||| || || || |||||||| || |||||||| ||| Sbjct 193659 AAGGTACGACCGTCCTCTAGCTGCTTACCGGCGAAGATAAGGCGCTGTTG---GTCTGGG 193603 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| ||||| |||||||| || || | |||||||| || || | ||| || || Sbjct 193602 GGGATGCCTTCCTTATCCTGAATCTTACCCTTCACGTTGTCGATCGTATCCGAAGACTCG 193543 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || || || ||||| || || ||||| || |||||||| Sbjct 193542 ACCTCGAGAGTAATAGTTTTACCGGTAAGGGTTTTGACAAAAATCTGCAT 193493 Score = 96.9 bits (106), Expect = 8e-15 Identities = 139/192 (72%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||||| || ||||| |||||||||||||||| ||| ||||| || ||| Sbjct 193184 AGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGAGAGAGTGCGCCCATCT 193125 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTA 288378 || | ||||| || ||||| |||| |||||| || ||| || || |||||||| Sbjct 193124 TCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTG---GTCTGGAGGAATCCCTTCTTTG 193068 Query 288379 TCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 || ||||| || ||| ||||| || || || | || || || || || | ||||| Sbjct 193067 TCTTGGATCTT-GCTCTTCACATTGTCGATGGTGTCCGAGGACTCAACCTCCAAAGTGAT 193009 Query 288438 CGTCTTCCCGGT 288449 ||||| ||||| Sbjct 193008 GGTCTTTCCGGT 192997 >seq340 Length=732193 Score = 89.7 bits (98), Expect = 1e-12 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 269117 AAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGA 269176 |||| ||| | ||| ||| | || ||| || | | || ||||| | | ||||||| Sbjct 107584 AAGAATTCTTGACTGAAGCTCTTCCTTGTGCTCTTTTGGGCATGAACTCTAAGCTCATGA 107525 Query 269177 ATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGT 269236 | || ||||| ||||| || || || ||| | | | | |||||| | || | | Sbjct 107524 AGCAGTATATTGAATTTGTTGCCGACCGTCTTCTGTTGTCTCTCGGTAACCCAAAGTTTT 107465 Query 269237 ACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACT 269296 ||||| | | || || |||| ||||||||| ||||| || | || || || |||| Sbjct 107464 ACAATGCCACTAACCCATTCGACTTTATGGAGTCTATTTCTCTTGCCGGCAAAACCAACT 107405 Query 269297 TCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATG 269340 ||||||| ||||||||| | |||||||| ||||||| ||| Sbjct 107404 TCTTCGAGAAGCGTGTCGGAGACTATCAGAAAGCTGGTGTCATG 107361 >seq98 Length=1126903 Score = 87.8 bits (96), Expect = 4e-12 Identities = 120/164 (73%), Gaps = 8/164 (5%) Strand=Plus/Plus Query 288315 TCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTC 288374 ||| ||||| | ||| || || || || |||| | ||| ||| ||||| || || Sbjct 1023254 TCCATCTTCGAGTTGCTTCCCAGCAAATATCAACCTCTGCTGATCCGGAGGGATCCCCTC 1023313 Query 288375 TTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGA 288430 ||||| |||||||| ||| || || || || || | ||| |||| ||||| || | Sbjct 1023314 CTTATCTTGGATTTT-GCTCTTGACATTGTCAATTGTATCTGAGCTC---TCTACCTCCA 1023369 Query 288431 GCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||||||||||| |||||| ||||| ||||||||| Sbjct 1023370 AGGTGATGGTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCATT 1023413 >seq320 Length=806987 Score = 84.2 bits (92), Expect = 5e-11 Identities = 134/191 (70%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||||| || || |||||||| || || || | ||| ||||||||||| Sbjct 610470 AGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGAGAGGGTGCGTCCGTCC 610529 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTA 288378 || | || ||||| || ||||||| ||| || || |||| || ||||| || || Sbjct 610530 TCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTG---ATCTGGAGGAATTCCCTCCTTG 610586 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 ||||| || || | || ||||| || |||| || |||||| || || || || || Sbjct 610587 TCCTGAATCTTAGACTTGACGTTGTCGATAGTGTCCGACGATTCCACCTCAAGGGTAATG 610646 Query 288439 GTCTTCCCGGT 288449 || || || || Sbjct 610647 GTTTTTCCAGT 610657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179648384499844