Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq340 107 4e-18 >seq340 Length=732193 Score = 107 bits (118), Expect = 4e-18 Identities = 255/379 (67%), Gaps = 10/379 (3%) Strand=Plus/Minus Query 243380 TGATGCCTGGCCTCGGTCTGTCT--AACGAGTTCATCAGTCGCGACGAGGGCCTTCACCA 243437 ||||||||||| | ||| ||| |||||| ||||| |||||||||||||| ||| Sbjct 107734 TGATGCCTGGCTT--GTCATTCTCAAACGAGCTCATCTCCCGCGACGAGGGCCTCCACAC 107677 Query 243438 ACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCAT-TCGAAACG--GT 243494 | |||| || ||| |||| | | |||||| | || | || | | | || Sbjct 107676 TGACTTCGCCTGTCTGTTGT--TCAAC-CACTTGAACAACCGCCCTTCTCAACAGGCTGT 107620 Query 243495 CAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCC 243554 || | ||||| || || |||| | || | |||||| | || ||| |||| Sbjct 107619 TCAAGATATCATTGTCGAGGCTGTTGGCATTGAGCAAGAATTCTTGACTGAAGCTCTTCC 107560 Query 243555 ATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGA 243614 || ||| | |||||||||||| | |||||| ||||| || ||||| || ||||| Sbjct 107559 TTGTGCTCTTTTGGGCATGAACTCTAAGCTCATGAAGCAGTATATTGAATTTGTTGCCGA 107500 Query 243615 CCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTT 243674 ||| || | | | || ||| | || | ||||| ||| ||||| || | ||| Sbjct 107499 CCGTCTTCTGTTGTCTCTCGGTAACCCAAAGTTTTACAATGCCACTAACCCATTCGACTT 107440 Query 243675 TATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTA 243734 ||||||| ||||| ||| || ||||| ||||||||||| ||||||||| | || || Sbjct 107439 TATGGAGTCTATTTCTCTTGCCGGCAAAACCAACTTCTTCGAGAAGCGTGTCGGAGACTA 107380 Query 243735 TCAACGCCCTGGTGTGATG 243753 ||| ||||||| ||| Sbjct 107379 TCAGAAAGCTGGTGTCATG 107361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102874376001300