Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq320 109 6e-19 seq383 84.2 2e-11 >seq320 Length=806987 Score = 109 bits (120), Expect = 6e-19 Identities = 142/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| |||||||||| || || || | || || |||||||| |||||||| Sbjct 609979 CTCCTTCTGAATGTTGTAATCAGAGAGGGTACGGCCATCCTCAAGCTGCTTTCCAGCGAA 610038 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | ||| |||||||| | || | | |||||| || |||||| |||| ||| Sbjct 610039 GATCAATCGTTGCTGGTCTGGAGGAATACCCTCCTTATCTTGGATTTTCGACTTGA-CGT 610097 Query 42137 CGCCACCG-TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | || | |||| || || || |||| ||||| || ||||| |||| ||||| | Sbjct 610098 TGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATTGTCTTGCCGGTTAAGGTCTTGA 610157 Query 42196 CAAAGATTTGCATT 42209 |||||||||||||| Sbjct 610158 CAAAGATTTGCATT 610171 >seq383 Length=466833 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| ||||| |||||| || || || |||| |||||||||||||| ||||| Sbjct 193684 CTCCTTTTGGATATTATAATCACTCAAGGTACGACCGTCCTCTAGCTGCTTACCGGCGAA 193625 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||| ||||| | || | || ||||| ||| ||| | || | ||| Sbjct 193624 GATAAGGCGCTGTTGGTCTGGGGGGATGCCTTCCTTATCC-TGAATCTTACCCTTCACGT 193566 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||| || || || || |||| || || ||||| || || || || || | Sbjct 193565 TGTCGATCGTATCCGAAGACTCGACCTCGAGAGTAATAGTTTTACCGGTAAGGGTTTTGA 193506 Query 42196 CAAAGATTTGCAT 42208 |||| || ||||| Sbjct 193505 CAAAAATCTGCAT 193493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543210097516320