Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tuber_20melanosporum_20[genbank_20GCA_5F000151645.1_202010-05-03] 398 sequences; 124,945,702 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq320 114 1e-20 seq383 107 2e-18 seq98 87.8 2e-12 >seq320 Length=806987 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| || | | ||| || | |||| || || ||||| |||||||| ||||| | Sbjct 609716 CCGCCACGAAGACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAA 609775 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || | || || | |||||| || ||| | || | ||||||||||| |||||| Sbjct 609776 AGAGTACGACCATCCTCCAACTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCTGGAGGA 609835 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| ||| || | ||| ||| | ||||| Sbjct 609836 ATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATTGTGTCAGAAGACTCCACC 609895 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | || | ||||| |||||||||||||| ||||||||||||||| Sbjct 609896 TCGAGGGTGATAGTCTTTCCGGTCAAAGTTTTAACGAAAATTTGCATT 609943 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || || | || ||| || ||||||| || || || || |||||||||||||| | | Sbjct 609944 CCACCACGAAGTCGAAGGACGAGATGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGAG 610003 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || | || ||||||||||| || || | || | || |||||||| |||||| Sbjct 610004 AGGGTACGGCCATCCTCAAGCTGCTTTCCAGCGAAGATCAATCGTTGCTGGTCTGGAGGA 610063 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || ||||| ||||| ||| || || | || || || || || Sbjct 610064 ATACCCTCCTTATCTTGGATTTTCGACTTGACGTTGTCAATGGTGTCCGAGGACTCGACC 610123 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | || | ||||||||||| || || || || || ||||||||| Sbjct 610124 TCGAGGGTGATTGTCTTGCCGGTTAAGGTCTTGACAAAGATTTGCATT 610171 Score = 102 bits (112), Expect = 8e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || ||||||| || || || ||||| ||||||||||||| Sbjct 610454 ACCGCCACGAAGACGGAGAACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAATCTGA 610513 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| ||||||||||| || ||| | || | || ||||| || ||||| Sbjct 610514 GAGGGTGCGTCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGAGG 610573 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 |||||| || || || || || || Sbjct 610574 AATTCCCTCCTTGTCCTGAATCTT 610597 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 ||||| || | | ||| || | |||| || || ||||| |||||||| ||||| | Sbjct 610172 CCGCCACGAAGACGAAGAACCAAGTGAAGGGTGGACTCTTTCTGAATGTTATAATCGGAA 610231 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || | || ||||| ||||||||||| |||| | ||||||||||| || || Sbjct 610232 AGGGTACGACCATCCTCAAGTTGCTTGCCGGCGAAAATCAAGCGCTGCTGGTCTGGGGGG 610291 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || ||| ||| ||| || | |||||| | ||||| Sbjct 610292 ATGCCCTCCTTATCCTGGATCTTTGACTTGACATTGTCAATAGTATCAGAAGACTCCACC 610351 Query 64397 TCTACAGTTACGGTCTTGCCGGT 64419 || | || | |||||||| || Sbjct 610352 TCGAGGGTGATTGTCTTGCCAGT 610374 >seq383 Length=466833 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| |||| | || || ||||||| || || ||||| || || || || || | Sbjct 193200 ACCGCCACGCAGACGCAGGACAAGATGAAGGGTAGACTCTTTCTGGATATTATAGTCGGA 193141 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | ||||| ||||| || ||||| |||| | ||||||||||| ||||| Sbjct 193140 GAGAGTGCGCCCATCTTCGAGCTGTTTACCGGCGAAAATCAAACGCTGCTGGTCTGGAGG 193081 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| ||||| || || ||| ||| || | || || || || || Sbjct 193080 AATCCCTTCTTTGTCTTGGATCTTGCTCTTCACATTGTCGATGGTGTCCGAGGACTCAAC 193021 Query 64396 TTCTACAGTTACGGTCTTGCCGGT 64419 || | ||| | |||||| ||||| Sbjct 193020 CTCCAAAGTGATGGTCTTTCCGGT 192997 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || || || | || || ||||| ||||||||||| || | Sbjct 193492 ACCACCTCGCAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCGGA 193433 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||| | | ||||| | |||||||||||| | || || || ||||| || ||||| Sbjct 193432 GAGGGTTCTGCCATCTTCCAATTGCTTGCCGGCAAATATCAGACGTTGCTGATCTGGAGG 193373 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || ||||| ||||| || ||| || | ||| || | || || Sbjct 193372 AATGCCCTCCTTGTCTTGAATTTTGCCTTTGACATTATCGATTGTGTCCGAAGACTCGAC 193313 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCA 64421 ||| | ||| | ||||| ||||||| Sbjct 193312 TTCAAGAGTGATTGTCTTTCCGGTCA 193287 >seq98 Length=1126903 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 ||||| || ||||| || ||| | || | || |||||| || ||||| || || || || Sbjct 1023258 TCTTCGAGTTGCTTCCCAGCAAATATCAACCTCTGCTGATCCGGAGGGATCCCCTCCTTA 1023317 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 ||||| ||||| ||| ||| || | |||||| | || || || | || | | Sbjct 1023318 TCTTGGATTTTGCTCTTGACATTGTCAATTGTATCTGAGCTCTCTACCTCCAAGGTGATG 1023377 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||| ||||||||||| || |||||||| |||||| Sbjct 1023378 GTCTTCCCGGTCAAAGTCTTCACGAAAATCTGCATT 1023413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642314267120